Gene : Tp57577_TGAC_v2_gene38840 T. pratense v2
Defline:  (1 of 2) K11366 - ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] (USP22_27_51, UBP8) Genomic Order:  2155
Name:  ? Tp57577_TGAC_v2_gene38840 Secondary Identifier:  ? PAC:35979993
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38840 0.5kb upstream 0.5kb upstream 4567 true Tp57577_TGAC_v2_LG1: 18200882-18205448 Trifolium pratense
Tp57577_TGAC_v2_gene38840 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 18204949-18205448 Trifolium pratense
Tp57577_TGAC_v2_gene38840 0.5kb downstream 0.5kb downstream 4567 true Tp57577_TGAC_v2_LG1: 18200382-18204948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 18200382-18200881 Trifolium pratense
Tp57577_TGAC_v2_gene38840 1.0kb upstream 1.0kb upstream 5067 true Tp57577_TGAC_v2_LG1: 18200882-18205948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 18204949-18205948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 1.0kb downstream 1.0kb downstream 5067 true Tp57577_TGAC_v2_LG1: 18199882-18204948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 18199882-18200881 Trifolium pratense
Tp57577_TGAC_v2_gene38840 2.0kb upstream 2.0kb upstream 6067 true Tp57577_TGAC_v2_LG1: 18200882-18206948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 18204949-18206948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 2.0kb downstream 2.0kb downstream 6067 true Tp57577_TGAC_v2_LG1: 18198882-18204948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 18198882-18200881 Trifolium pratense
Tp57577_TGAC_v2_gene38840 5.0kb upstream 5.0kb upstream 9067 true Tp57577_TGAC_v2_LG1: 18200882-18209948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 18204949-18209948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 5.0kb downstream 5.0kb downstream 9067 true Tp57577_TGAC_v2_LG1: 18195882-18204948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 18195882-18200881 Trifolium pratense
Tp57577_TGAC_v2_gene38840 10.0kb upstream 10.0kb upstream 14067 true Tp57577_TGAC_v2_LG1: 18200882-18214948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 18204949-18214948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 10.0kb downstream 10.0kb downstream 14067 true Tp57577_TGAC_v2_LG1: 18190882-18204948 Trifolium pratense
Tp57577_TGAC_v2_gene38840 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 18190882-18200881 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309334 5265 Fabidae View MSA
124070704 5270 Rosid View MSA
123736956 5271 Pentapetalae View MSA
122795648 5272 Eudicot View MSA
122047391 5273 Angiosperm View MSA
121345894 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain