Gene : Tp57577_TGAC_v2_gene38848 T. pratense v2
Defline:  (1 of 3) PTHR26402:SF558 - TWO-COMPONENT RESPONSE REGULATOR ARR18 Genomic Order:  2165
Name:  ? Tp57577_TGAC_v2_gene38848 Secondary Identifier:  ? PAC:35978899
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38848 0.5kb upstream 0.5kb upstream 2009 true Tp57577_TGAC_v2_LG1: 18281100-18283108 Trifolium pratense
Tp57577_TGAC_v2_gene38848 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 18282609-18283108 Trifolium pratense
Tp57577_TGAC_v2_gene38848 0.5kb downstream 0.5kb downstream 2009 true Tp57577_TGAC_v2_LG1: 18280600-18282608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 18280600-18281099 Trifolium pratense
Tp57577_TGAC_v2_gene38848 1.0kb upstream 1.0kb upstream 2509 true Tp57577_TGAC_v2_LG1: 18281100-18283608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 18282609-18283608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 1.0kb downstream 1.0kb downstream 2509 true Tp57577_TGAC_v2_LG1: 18280100-18282608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 18280100-18281099 Trifolium pratense
Tp57577_TGAC_v2_gene38848 2.0kb upstream 2.0kb upstream 3509 true Tp57577_TGAC_v2_LG1: 18281100-18284608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 18282609-18284608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 2.0kb downstream 2.0kb downstream 3509 true Tp57577_TGAC_v2_LG1: 18279100-18282608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 18279100-18281099 Trifolium pratense
Tp57577_TGAC_v2_gene38848 5.0kb upstream 5.0kb upstream 6509 true Tp57577_TGAC_v2_LG1: 18281100-18287608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 18282609-18287608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 5.0kb downstream 5.0kb downstream 6509 true Tp57577_TGAC_v2_LG1: 18276100-18282608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 18276100-18281099 Trifolium pratense
Tp57577_TGAC_v2_gene38848 10.0kb upstream 10.0kb upstream 11509 true Tp57577_TGAC_v2_LG1: 18281100-18292608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 18282609-18292608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 10.0kb downstream 10.0kb downstream 11509 true Tp57577_TGAC_v2_LG1: 18271100-18282608 Trifolium pratense
Tp57577_TGAC_v2_gene38848 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 18271100-18281099 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313890 5265 Fabidae View MSA
124074544 5270 Rosid View MSA
123752744 5271 Pentapetalae View MSA
122797364 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain