Gene : Tp57577_TGAC_v2_gene3795 T. pratense v2
Defline:  (1 of 1) PTHR10357//PTHR10357:SF153 - ALPHA-AMYLASE // SUBFAMILY NOT NAMED Genomic Order:  2511
Name:  ? Tp57577_TGAC_v2_gene3795 Secondary Identifier:  ? PAC:35980930
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3795 0.5kb upstream 0.5kb upstream 3009 true Tp57577_TGAC_v2_LG1: 21325373-21328381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 21325373-21325872 Trifolium pratense
Tp57577_TGAC_v2_gene3795 0.5kb downstream 0.5kb downstream 3009 true Tp57577_TGAC_v2_LG1: 21325873-21328881 Trifolium pratense
Tp57577_TGAC_v2_gene3795 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 21328382-21328881 Trifolium pratense
Tp57577_TGAC_v2_gene3795 1.0kb upstream 1.0kb upstream 3509 true Tp57577_TGAC_v2_LG1: 21324873-21328381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 21324873-21325872 Trifolium pratense
Tp57577_TGAC_v2_gene3795 1.0kb downstream 1.0kb downstream 3509 true Tp57577_TGAC_v2_LG1: 21325873-21329381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 21328382-21329381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 2.0kb upstream 2.0kb upstream 4509 true Tp57577_TGAC_v2_LG1: 21323873-21328381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 21323873-21325872 Trifolium pratense
Tp57577_TGAC_v2_gene3795 2.0kb downstream 2.0kb downstream 4509 true Tp57577_TGAC_v2_LG1: 21325873-21330381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 21328382-21330381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 5.0kb upstream 5.0kb upstream 7509 true Tp57577_TGAC_v2_LG1: 21320873-21328381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 21320873-21325872 Trifolium pratense
Tp57577_TGAC_v2_gene3795 5.0kb downstream 5.0kb downstream 7509 true Tp57577_TGAC_v2_LG1: 21325873-21333381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 21328382-21333381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 10.0kb upstream 10.0kb upstream 12509 true Tp57577_TGAC_v2_LG1: 21315873-21328381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 21315873-21325872 Trifolium pratense
Tp57577_TGAC_v2_gene3795 10.0kb downstream 10.0kb downstream 12509 true Tp57577_TGAC_v2_LG1: 21325873-21338381 Trifolium pratense
Tp57577_TGAC_v2_gene3795 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 21328382-21338381 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301311 5265 Fabidae View MSA
124065639 5270 Rosid View MSA
123738946 5271 Pentapetalae View MSA
122797771 5272 Eudicot View MSA
122048230 5273 Angiosperm View MSA
121344557 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain