Gene : Tp57577_TGAC_v2_gene3807 T. pratense v2
Defline:  (1 of 2) PTHR23315:SF64 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  2458
Name:  ? Tp57577_TGAC_v2_gene3807 Secondary Identifier:  ? PAC:35979948
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3807 0.5kb upstream 0.5kb upstream 3194 true Tp57577_TGAC_v2_LG1: 20880479-20883672 Trifolium pratense
Tp57577_TGAC_v2_gene3807 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 20883173-20883672 Trifolium pratense
Tp57577_TGAC_v2_gene3807 0.5kb downstream 0.5kb downstream 3194 true Tp57577_TGAC_v2_LG1: 20879979-20883172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 20879979-20880478 Trifolium pratense
Tp57577_TGAC_v2_gene3807 1.0kb upstream 1.0kb upstream 3694 true Tp57577_TGAC_v2_LG1: 20880479-20884172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 20883173-20884172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 1.0kb downstream 1.0kb downstream 3694 true Tp57577_TGAC_v2_LG1: 20879479-20883172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 20879479-20880478 Trifolium pratense
Tp57577_TGAC_v2_gene3807 2.0kb upstream 2.0kb upstream 4694 true Tp57577_TGAC_v2_LG1: 20880479-20885172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 20883173-20885172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 2.0kb downstream 2.0kb downstream 4694 true Tp57577_TGAC_v2_LG1: 20878479-20883172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 20878479-20880478 Trifolium pratense
Tp57577_TGAC_v2_gene3807 5.0kb upstream 5.0kb upstream 7694 true Tp57577_TGAC_v2_LG1: 20880479-20888172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 20883173-20888172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 5.0kb downstream 5.0kb downstream 7694 true Tp57577_TGAC_v2_LG1: 20875479-20883172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 20875479-20880478 Trifolium pratense
Tp57577_TGAC_v2_gene3807 10.0kb upstream 10.0kb upstream 12694 true Tp57577_TGAC_v2_LG1: 20880479-20893172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 20883173-20893172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 10.0kb downstream 10.0kb downstream 12694 true Tp57577_TGAC_v2_LG1: 20870479-20883172 Trifolium pratense
Tp57577_TGAC_v2_gene3807 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 20870479-20880478 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305892 5265 Fabidae View MSA
124062605 5270 Rosid View MSA
123738053 5271 Pentapetalae View MSA
122796694 5272 Eudicot View MSA
122047574 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain