Gene : Tp57577_TGAC_v2_gene18693 T. pratense v2
Defline:  (1 of 4) PTHR27003:SF5 - DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN Genomic Order:  11
Name:  ? Tp57577_TGAC_v2_gene18693 Secondary Identifier:  ? PAC:35960827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18693 0.5kb upstream 0.5kb upstream 6321 true Tp57577_TGAC_v2_scaf_301: 105336-111656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_301: 105336-105835 Trifolium pratense
Tp57577_TGAC_v2_gene18693 0.5kb downstream 0.5kb downstream 6321 true Tp57577_TGAC_v2_scaf_301: 105836-112156 Trifolium pratense
Tp57577_TGAC_v2_gene18693 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_301: 111657-112156 Trifolium pratense
Tp57577_TGAC_v2_gene18693 1.0kb upstream 1.0kb upstream 6821 true Tp57577_TGAC_v2_scaf_301: 104836-111656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_301: 104836-105835 Trifolium pratense
Tp57577_TGAC_v2_gene18693 1.0kb downstream 1.0kb downstream 6821 true Tp57577_TGAC_v2_scaf_301: 105836-112656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_301: 111657-112656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 2.0kb upstream 2.0kb upstream 7821 true Tp57577_TGAC_v2_scaf_301: 103836-111656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_301: 103836-105835 Trifolium pratense
Tp57577_TGAC_v2_gene18693 2.0kb downstream 2.0kb downstream 7821 true Tp57577_TGAC_v2_scaf_301: 105836-113656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_301: 111657-113656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 5.0kb upstream 5.0kb upstream 10821 true Tp57577_TGAC_v2_scaf_301: 100836-111656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_301: 100836-105835 Trifolium pratense
Tp57577_TGAC_v2_gene18693 5.0kb downstream 5.0kb downstream 10821 true Tp57577_TGAC_v2_scaf_301: 105836-116656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_301: 111657-116656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 10.0kb upstream 10.0kb upstream 15821 true Tp57577_TGAC_v2_scaf_301: 95836-111656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_301: 95836-105835 Trifolium pratense
Tp57577_TGAC_v2_gene18693 10.0kb downstream 10.0kb downstream 15821 true Tp57577_TGAC_v2_scaf_301: 105836-121656 Trifolium pratense
Tp57577_TGAC_v2_gene18693 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_301: 111657-121656 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296473 5265 Fabidae View MSA
124063346 5270 Rosid View MSA
123750625 5271 Pentapetalae View MSA
122787899 5272 Eudicot View MSA
122042080 5273 Angiosperm View MSA
121348136 5274 Embryophyte View MSA
123380739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain