Gene : Tp57577_TGAC_v2_gene38857 T. pratense v2
Defline:  (1 of 1) K05928 - tocopherol O-methyltransferase (E2.1.1.95) Genomic Order:  2112
Name:  ? Tp57577_TGAC_v2_gene38857 Secondary Identifier:  ? PAC:35978194
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1422 Trifolium pratense pathologic  
Tpratense PWY-7436 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38857 0.5kb upstream 0.5kb upstream 4408 true Tp57577_TGAC_v2_LG1: 17858048-17862455 Trifolium pratense
Tp57577_TGAC_v2_gene38857 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 17861956-17862455 Trifolium pratense
Tp57577_TGAC_v2_gene38857 0.5kb downstream 0.5kb downstream 4408 true Tp57577_TGAC_v2_LG1: 17857548-17861955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 17857548-17858047 Trifolium pratense
Tp57577_TGAC_v2_gene38857 1.0kb upstream 1.0kb upstream 4908 true Tp57577_TGAC_v2_LG1: 17858048-17862955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 17861956-17862955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 1.0kb downstream 1.0kb downstream 4908 true Tp57577_TGAC_v2_LG1: 17857048-17861955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 17857048-17858047 Trifolium pratense
Tp57577_TGAC_v2_gene38857 2.0kb upstream 2.0kb upstream 5908 true Tp57577_TGAC_v2_LG1: 17858048-17863955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 17861956-17863955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 2.0kb downstream 2.0kb downstream 5908 true Tp57577_TGAC_v2_LG1: 17856048-17861955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 17856048-17858047 Trifolium pratense
Tp57577_TGAC_v2_gene38857 5.0kb upstream 5.0kb upstream 8908 true Tp57577_TGAC_v2_LG1: 17858048-17866955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 17861956-17866955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 5.0kb downstream 5.0kb downstream 8908 true Tp57577_TGAC_v2_LG1: 17853048-17861955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 17853048-17858047 Trifolium pratense
Tp57577_TGAC_v2_gene38857 10.0kb upstream 10.0kb upstream 13908 true Tp57577_TGAC_v2_LG1: 17858048-17871955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 17861956-17871955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 10.0kb downstream 10.0kb downstream 13908 true Tp57577_TGAC_v2_LG1: 17848048-17861955 Trifolium pratense
Tp57577_TGAC_v2_gene38857 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 17848048-17858047 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299089 5265 Fabidae View MSA
124067151 5270 Rosid View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain