Gene : Tp57577_TGAC_v2_gene38865 T. pratense v2
Defline:  (1 of 1) K00811 - aspartate aminotransferase, chloroplastic (ASP5) Genomic Order:  2169
Name:  ? Tp57577_TGAC_v2_gene38865 Secondary Identifier:  ? PAC:35981329
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ASPARTATE-DEG1-PWY Trifolium pratense pathologic  
Tpratense ASPARTATESYN-PWY Trifolium pratense pathologic  
Tpratense PWY-3001 Trifolium pratense pathologic  
Tpratense PWY-7115 Trifolium pratense pathologic  
Tpratense PWY-7117 Trifolium pratense pathologic  
Tpratense THRESYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38865 0.5kb upstream 0.5kb upstream 6045 true Tp57577_TGAC_v2_LG1: 18327219-18333263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 18327219-18327718 Trifolium pratense
Tp57577_TGAC_v2_gene38865 0.5kb downstream 0.5kb downstream 6045 true Tp57577_TGAC_v2_LG1: 18327719-18333763 Trifolium pratense
Tp57577_TGAC_v2_gene38865 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 18333264-18333763 Trifolium pratense
Tp57577_TGAC_v2_gene38865 1.0kb upstream 1.0kb upstream 6545 true Tp57577_TGAC_v2_LG1: 18326719-18333263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 18326719-18327718 Trifolium pratense
Tp57577_TGAC_v2_gene38865 1.0kb downstream 1.0kb downstream 6545 true Tp57577_TGAC_v2_LG1: 18327719-18334263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 18333264-18334263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 2.0kb upstream 2.0kb upstream 7545 true Tp57577_TGAC_v2_LG1: 18325719-18333263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 18325719-18327718 Trifolium pratense
Tp57577_TGAC_v2_gene38865 2.0kb downstream 2.0kb downstream 7545 true Tp57577_TGAC_v2_LG1: 18327719-18335263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 18333264-18335263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 5.0kb upstream 5.0kb upstream 10545 true Tp57577_TGAC_v2_LG1: 18322719-18333263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 18322719-18327718 Trifolium pratense
Tp57577_TGAC_v2_gene38865 5.0kb downstream 5.0kb downstream 10545 true Tp57577_TGAC_v2_LG1: 18327719-18338263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 18333264-18338263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 10.0kb upstream 10.0kb upstream 15545 true Tp57577_TGAC_v2_LG1: 18317719-18333263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 18317719-18327718 Trifolium pratense
Tp57577_TGAC_v2_gene38865 10.0kb downstream 10.0kb downstream 15545 true Tp57577_TGAC_v2_LG1: 18327719-18343263 Trifolium pratense
Tp57577_TGAC_v2_gene38865 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 18333264-18343263 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303069 5265 Fabidae View MSA
124066749 5270 Rosid View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain