Gene : Tp57577_TGAC_v2_gene8487 T. pratense v2
Defline:  (1 of 2) 2.6.1.45 - Serine--glyoxylate transaminase / SGAT Genomic Order:  32
Name:  ? Tp57577_TGAC_v2_gene8487 Secondary Identifier:  ? PAC:35982612
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLYSYN-ALA-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8487 0.5kb upstream 0.5kb upstream 4543 true Tp57577_TGAC_v2_scaf_299: 262928-267470 Trifolium pratense
Tp57577_TGAC_v2_gene8487 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_299: 266971-267470 Trifolium pratense
Tp57577_TGAC_v2_gene8487 0.5kb downstream 0.5kb downstream 4543 true Tp57577_TGAC_v2_scaf_299: 262428-266970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_299: 262428-262927 Trifolium pratense
Tp57577_TGAC_v2_gene8487 1.0kb upstream 1.0kb upstream 5043 true Tp57577_TGAC_v2_scaf_299: 262928-267970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_299: 266971-267970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 1.0kb downstream 1.0kb downstream 5043 true Tp57577_TGAC_v2_scaf_299: 261928-266970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_299: 261928-262927 Trifolium pratense
Tp57577_TGAC_v2_gene8487 2.0kb upstream 2.0kb upstream 6043 true Tp57577_TGAC_v2_scaf_299: 262928-268970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_299: 266971-268970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 2.0kb downstream 2.0kb downstream 6043 true Tp57577_TGAC_v2_scaf_299: 260928-266970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_299: 260928-262927 Trifolium pratense
Tp57577_TGAC_v2_gene8487 5.0kb upstream 5.0kb upstream 9043 true Tp57577_TGAC_v2_scaf_299: 262928-271970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_299: 266971-271970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 5.0kb downstream 5.0kb downstream 9043 true Tp57577_TGAC_v2_scaf_299: 257928-266970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_299: 257928-262927 Trifolium pratense
Tp57577_TGAC_v2_gene8487 10.0kb upstream 10.0kb upstream 14043 true Tp57577_TGAC_v2_scaf_299: 262928-276970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_299: 266971-276970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 10.0kb downstream 10.0kb downstream 14043 true Tp57577_TGAC_v2_scaf_299: 252928-266970 Trifolium pratense
Tp57577_TGAC_v2_gene8487 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_299: 252928-262927 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295061 5265 Fabidae View MSA
124065045 5270 Rosid View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain