Gene : Tp57577_TGAC_v2_gene20232 T. pratense v2

Defline:  (1 of 1) PTHR31384:SF17 - AUXIN RESPONSE FACTOR 11-RELATED Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene20232 Secondary Identifier:  ? PAC:35960705

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20232 0.5kb upstream 0.5kb upstream 12548 true Tp57577_TGAC_v2_scaf_318: 93176-105723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_318: 93176-93675 Trifolium pratense
Tp57577_TGAC_v2_gene20232 0.5kb downstream 0.5kb downstream 12548 true Tp57577_TGAC_v2_scaf_318: 93676-106223 Trifolium pratense
Tp57577_TGAC_v2_gene20232 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_318: 105724-106223 Trifolium pratense
Tp57577_TGAC_v2_gene20232 1.0kb upstream 1.0kb upstream 13048 true Tp57577_TGAC_v2_scaf_318: 92676-105723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_318: 92676-93675 Trifolium pratense
Tp57577_TGAC_v2_gene20232 1.0kb downstream 1.0kb downstream 13048 true Tp57577_TGAC_v2_scaf_318: 93676-106723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_318: 105724-106723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 2.0kb upstream 2.0kb upstream 14048 true Tp57577_TGAC_v2_scaf_318: 91676-105723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_318: 91676-93675 Trifolium pratense
Tp57577_TGAC_v2_gene20232 2.0kb downstream 2.0kb downstream 14048 true Tp57577_TGAC_v2_scaf_318: 93676-107723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_318: 105724-107723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 5.0kb upstream 5.0kb upstream 17048 true Tp57577_TGAC_v2_scaf_318: 88676-105723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_318: 88676-93675 Trifolium pratense
Tp57577_TGAC_v2_gene20232 5.0kb downstream 5.0kb downstream 17048 true Tp57577_TGAC_v2_scaf_318: 93676-110723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_318: 105724-110723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 10.0kb upstream 10.0kb upstream 22048 true Tp57577_TGAC_v2_scaf_318: 83676-105723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_318: 83676-93675 Trifolium pratense
Tp57577_TGAC_v2_gene20232 10.0kb downstream 10.0kb downstream 22048 true Tp57577_TGAC_v2_scaf_318: 93676-115723 Trifolium pratense
Tp57577_TGAC_v2_gene20232 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_318: 105724-115723 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308659 5265 Fabidae View MSA
124070371 5270 Rosid View MSA
123743990 5271 Pentapetalae View MSA
122792006 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain