Gene : Tp57577_TGAC_v2_gene19845 T. pratense v2
Defline:  (1 of 1) PTHR22950//PTHR22950:SF260 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene19845 Secondary Identifier:  ? PAC:35962731
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19845 0.5kb upstream 0.5kb upstream 9225 true Tp57577_TGAC_v2_scaf_322: 54681-63905 Trifolium pratense
Tp57577_TGAC_v2_gene19845 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_322: 63406-63905 Trifolium pratense
Tp57577_TGAC_v2_gene19845 0.5kb downstream 0.5kb downstream 9225 true Tp57577_TGAC_v2_scaf_322: 54181-63405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_322: 54181-54680 Trifolium pratense
Tp57577_TGAC_v2_gene19845 1.0kb upstream 1.0kb upstream 9725 true Tp57577_TGAC_v2_scaf_322: 54681-64405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_322: 63406-64405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 1.0kb downstream 1.0kb downstream 9725 true Tp57577_TGAC_v2_scaf_322: 53681-63405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_322: 53681-54680 Trifolium pratense
Tp57577_TGAC_v2_gene19845 2.0kb upstream 2.0kb upstream 10725 true Tp57577_TGAC_v2_scaf_322: 54681-65405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_322: 63406-65405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 2.0kb downstream 2.0kb downstream 10725 true Tp57577_TGAC_v2_scaf_322: 52681-63405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_322: 52681-54680 Trifolium pratense
Tp57577_TGAC_v2_gene19845 5.0kb upstream 5.0kb upstream 13725 true Tp57577_TGAC_v2_scaf_322: 54681-68405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_322: 63406-68405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 5.0kb downstream 5.0kb downstream 13725 true Tp57577_TGAC_v2_scaf_322: 49681-63405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_322: 49681-54680 Trifolium pratense
Tp57577_TGAC_v2_gene19845 10.0kb upstream 10.0kb upstream 18725 true Tp57577_TGAC_v2_scaf_322: 54681-73405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_322: 63406-73405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 10.0kb downstream 10.0kb downstream 18725 true Tp57577_TGAC_v2_scaf_322: 44681-63405 Trifolium pratense
Tp57577_TGAC_v2_gene19845 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_322: 44681-54680 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314633 5265 Fabidae View MSA
124073275 5270 Rosid View MSA
123753033 5271 Pentapetalae View MSA
122796609 5272 Eudicot View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain