Gene : Tp57577_TGAC_v2_gene5544 T. pratense v2
Defline:  (1 of 1) PTHR31791:SF2 - FRIGIDA-LIKE PROTEIN 4A-RELATED Genomic Order:  168
Name:  ? Tp57577_TGAC_v2_gene5544 Secondary Identifier:  ? PAC:35979651
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5544 0.5kb upstream 0.5kb upstream 3308 true Tp57577_TGAC_v2_LG1: 1200965-1204272 Trifolium pratense
Tp57577_TGAC_v2_gene5544 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 1203773-1204272 Trifolium pratense
Tp57577_TGAC_v2_gene5544 0.5kb downstream 0.5kb downstream 3308 true Tp57577_TGAC_v2_LG1: 1200465-1203772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 1200465-1200964 Trifolium pratense
Tp57577_TGAC_v2_gene5544 1.0kb upstream 1.0kb upstream 3808 true Tp57577_TGAC_v2_LG1: 1200965-1204772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 1203773-1204772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 1.0kb downstream 1.0kb downstream 3808 true Tp57577_TGAC_v2_LG1: 1199965-1203772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 1199965-1200964 Trifolium pratense
Tp57577_TGAC_v2_gene5544 2.0kb upstream 2.0kb upstream 4808 true Tp57577_TGAC_v2_LG1: 1200965-1205772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 1203773-1205772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 2.0kb downstream 2.0kb downstream 4808 true Tp57577_TGAC_v2_LG1: 1198965-1203772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 1198965-1200964 Trifolium pratense
Tp57577_TGAC_v2_gene5544 5.0kb upstream 5.0kb upstream 7808 true Tp57577_TGAC_v2_LG1: 1200965-1208772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 1203773-1208772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 5.0kb downstream 5.0kb downstream 7808 true Tp57577_TGAC_v2_LG1: 1195965-1203772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 1195965-1200964 Trifolium pratense
Tp57577_TGAC_v2_gene5544 10.0kb upstream 10.0kb upstream 12808 true Tp57577_TGAC_v2_LG1: 1200965-1213772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 1203773-1213772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 10.0kb downstream 10.0kb downstream 12808 true Tp57577_TGAC_v2_LG1: 1190965-1203772 Trifolium pratense
Tp57577_TGAC_v2_gene5544 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 1190965-1200964 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302614 5265 Fabidae View MSA
124064726 5270 Rosid View MSA
123738104 5271 Pentapetalae View MSA
122790313 5272 Eudicot View MSA
122044909 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain