Gene : Tp57577_TGAC_v2_gene4913 T. pratense v2
Defline:  (1 of 1) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  836
Name:  ? Tp57577_TGAC_v2_gene4913 Secondary Identifier:  ? PAC:35979618
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4913 0.5kb upstream 0.5kb upstream 15824 true Tp57577_TGAC_v2_LG1: 6502874-6518697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 6502874-6503373 Trifolium pratense
Tp57577_TGAC_v2_gene4913 0.5kb downstream 0.5kb downstream 15824 true Tp57577_TGAC_v2_LG1: 6503374-6519197 Trifolium pratense
Tp57577_TGAC_v2_gene4913 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 6518698-6519197 Trifolium pratense
Tp57577_TGAC_v2_gene4913 1.0kb upstream 1.0kb upstream 16324 true Tp57577_TGAC_v2_LG1: 6502374-6518697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 6502374-6503373 Trifolium pratense
Tp57577_TGAC_v2_gene4913 1.0kb downstream 1.0kb downstream 16324 true Tp57577_TGAC_v2_LG1: 6503374-6519697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 6518698-6519697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 2.0kb upstream 2.0kb upstream 17324 true Tp57577_TGAC_v2_LG1: 6501374-6518697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 6501374-6503373 Trifolium pratense
Tp57577_TGAC_v2_gene4913 2.0kb downstream 2.0kb downstream 17324 true Tp57577_TGAC_v2_LG1: 6503374-6520697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 6518698-6520697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 5.0kb upstream 5.0kb upstream 20324 true Tp57577_TGAC_v2_LG1: 6498374-6518697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 6498374-6503373 Trifolium pratense
Tp57577_TGAC_v2_gene4913 5.0kb downstream 5.0kb downstream 20324 true Tp57577_TGAC_v2_LG1: 6503374-6523697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 6518698-6523697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 10.0kb upstream 10.0kb upstream 25324 true Tp57577_TGAC_v2_LG1: 6493374-6518697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 6493374-6503373 Trifolium pratense
Tp57577_TGAC_v2_gene4913 10.0kb downstream 10.0kb downstream 25324 true Tp57577_TGAC_v2_LG1: 6503374-6528697 Trifolium pratense
Tp57577_TGAC_v2_gene4913 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 6518698-6528697 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308481 5265 Fabidae View MSA
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain