Gene : Tp57577_TGAC_v2_gene4880 T. pratense v2
Defline:  (1 of 1) PTHR11712:SF226 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC Genomic Order:  848
Name:  ? Tp57577_TGAC_v2_gene4880 Secondary Identifier:  ? PAC:35978664
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense FASYN-ELONG-PWY Trifolium pratense pathologic  
Tpratense PWY-5156 Trifolium pratense pathologic  
Tpratense PWY-5971 Trifolium pratense pathologic  
Tpratense PWY-5989 Trifolium pratense pathologic  
Tpratense PWY-6282 Trifolium pratense pathologic  
Tpratense PWY-7388 Trifolium pratense pathologic  
Tpratense PWY-7663 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4880 0.5kb upstream 0.5kb upstream 5215 true Tp57577_TGAC_v2_LG1: 6600479-6605693 Trifolium pratense
Tp57577_TGAC_v2_gene4880 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 6605194-6605693 Trifolium pratense
Tp57577_TGAC_v2_gene4880 0.5kb downstream 0.5kb downstream 5215 true Tp57577_TGAC_v2_LG1: 6599979-6605193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 6599979-6600478 Trifolium pratense
Tp57577_TGAC_v2_gene4880 1.0kb upstream 1.0kb upstream 5715 true Tp57577_TGAC_v2_LG1: 6600479-6606193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 6605194-6606193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 1.0kb downstream 1.0kb downstream 5715 true Tp57577_TGAC_v2_LG1: 6599479-6605193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 6599479-6600478 Trifolium pratense
Tp57577_TGAC_v2_gene4880 2.0kb upstream 2.0kb upstream 6715 true Tp57577_TGAC_v2_LG1: 6600479-6607193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 6605194-6607193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 2.0kb downstream 2.0kb downstream 6715 true Tp57577_TGAC_v2_LG1: 6598479-6605193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 6598479-6600478 Trifolium pratense
Tp57577_TGAC_v2_gene4880 5.0kb upstream 5.0kb upstream 9715 true Tp57577_TGAC_v2_LG1: 6600479-6610193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 6605194-6610193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 5.0kb downstream 5.0kb downstream 9715 true Tp57577_TGAC_v2_LG1: 6595479-6605193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 6595479-6600478 Trifolium pratense
Tp57577_TGAC_v2_gene4880 10.0kb upstream 10.0kb upstream 14715 true Tp57577_TGAC_v2_LG1: 6600479-6615193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 6605194-6615193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 10.0kb downstream 10.0kb downstream 14715 true Tp57577_TGAC_v2_LG1: 6590479-6605193 Trifolium pratense
Tp57577_TGAC_v2_gene4880 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 6590479-6600478 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307628 5265 Fabidae View MSA
124064004 5270 Rosid View MSA
123747178 5271 Pentapetalae View MSA
122792015 5272 Eudicot View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain