Gene : Tp57577_TGAC_v2_gene4886 T. pratense v2
Defline:  (1 of 1) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Genomic Order:  761
Name:  ? Tp57577_TGAC_v2_gene4886 Secondary Identifier:  ? PAC:35980966
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4886 0.5kb upstream 0.5kb upstream 5341 true Tp57577_TGAC_v2_LG1: 6005098-6010438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 6005098-6005597 Trifolium pratense
Tp57577_TGAC_v2_gene4886 0.5kb downstream 0.5kb downstream 5341 true Tp57577_TGAC_v2_LG1: 6005598-6010938 Trifolium pratense
Tp57577_TGAC_v2_gene4886 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 6010439-6010938 Trifolium pratense
Tp57577_TGAC_v2_gene4886 1.0kb upstream 1.0kb upstream 5841 true Tp57577_TGAC_v2_LG1: 6004598-6010438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 6004598-6005597 Trifolium pratense
Tp57577_TGAC_v2_gene4886 1.0kb downstream 1.0kb downstream 5841 true Tp57577_TGAC_v2_LG1: 6005598-6011438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 6010439-6011438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 2.0kb upstream 2.0kb upstream 6841 true Tp57577_TGAC_v2_LG1: 6003598-6010438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 6003598-6005597 Trifolium pratense
Tp57577_TGAC_v2_gene4886 2.0kb downstream 2.0kb downstream 6841 true Tp57577_TGAC_v2_LG1: 6005598-6012438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 6010439-6012438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 5.0kb upstream 5.0kb upstream 9841 true Tp57577_TGAC_v2_LG1: 6000598-6010438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 6000598-6005597 Trifolium pratense
Tp57577_TGAC_v2_gene4886 5.0kb downstream 5.0kb downstream 9841 true Tp57577_TGAC_v2_LG1: 6005598-6015438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 6010439-6015438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 10.0kb upstream 10.0kb upstream 14841 true Tp57577_TGAC_v2_LG1: 5995598-6010438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 5995598-6005597 Trifolium pratense
Tp57577_TGAC_v2_gene4886 10.0kb downstream 10.0kb downstream 14841 true Tp57577_TGAC_v2_LG1: 6005598-6020438 Trifolium pratense
Tp57577_TGAC_v2_gene4886 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 6010439-6020438 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308593 5265 Fabidae View MSA
124066988 5270 Rosid View MSA
123748418 5271 Pentapetalae View MSA
122792340 5272 Eudicot View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain