Gene : Tp57577_TGAC_v2_gene8897 T. pratense v2

Defline:  (1 of 3) PTHR30345 - RIBOSE-5-PHOSPHATE ISOMERASE B Genomic Order:  1394
Name:  ? Tp57577_TGAC_v2_gene8897 Secondary Identifier:  ? PAC:35979023

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CALVIN-PWY Trifolium pratense pathologic  
Tpratense NONOXIPENT-PWY Trifolium pratense pathologic  
Tpratense PENTOSE-P-PWY Trifolium pratense pathologic  
Tpratense PHOTOALL-PWY Trifolium pratense pathologic  
Tpratense PWY-5723 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8897 0.5kb upstream 0.5kb upstream 1527 true Tp57577_TGAC_v2_LG1: 11620650-11622176 Trifolium pratense
Tp57577_TGAC_v2_gene8897 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 11621677-11622176 Trifolium pratense
Tp57577_TGAC_v2_gene8897 0.5kb downstream 0.5kb downstream 1527 true Tp57577_TGAC_v2_LG1: 11620150-11621676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 11620150-11620649 Trifolium pratense
Tp57577_TGAC_v2_gene8897 1.0kb upstream 1.0kb upstream 2027 true Tp57577_TGAC_v2_LG1: 11620650-11622676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 11621677-11622676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 1.0kb downstream 1.0kb downstream 2027 true Tp57577_TGAC_v2_LG1: 11619650-11621676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 11619650-11620649 Trifolium pratense
Tp57577_TGAC_v2_gene8897 2.0kb upstream 2.0kb upstream 3027 true Tp57577_TGAC_v2_LG1: 11620650-11623676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 11621677-11623676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 2.0kb downstream 2.0kb downstream 3027 true Tp57577_TGAC_v2_LG1: 11618650-11621676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 11618650-11620649 Trifolium pratense
Tp57577_TGAC_v2_gene8897 5.0kb upstream 5.0kb upstream 6027 true Tp57577_TGAC_v2_LG1: 11620650-11626676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 11621677-11626676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 5.0kb downstream 5.0kb downstream 6027 true Tp57577_TGAC_v2_LG1: 11615650-11621676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 11615650-11620649 Trifolium pratense
Tp57577_TGAC_v2_gene8897 10.0kb upstream 10.0kb upstream 11027 true Tp57577_TGAC_v2_LG1: 11620650-11631676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 11621677-11631676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 10.0kb downstream 10.0kb downstream 11027 true Tp57577_TGAC_v2_LG1: 11610650-11621676 Trifolium pratense
Tp57577_TGAC_v2_gene8897 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 11610650-11620649 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781818 5273 Angiosperm View MSA
122289449 5265 Fabidae View MSA
124051931 5270 Rosid View MSA
123750676 5271 Pentapetalae View MSA
122773793 5272 Eudicot View MSA
121053380 5274 Embryophyte View MSA
123093403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain