Gene : Tp57577_TGAC_v2_gene7614 T. pratense v2
Defline:  (1 of 14) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene7614 Secondary Identifier:  ? PAC:35961102
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene7614 0.5kb upstream 0.5kb upstream 4978 true Tp57577_TGAC_v2_scaf_546: 57828-62805 Trifolium pratense
Tp57577_TGAC_v2_gene7614 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_546: 62306-62805 Trifolium pratense
Tp57577_TGAC_v2_gene7614 0.5kb downstream 0.5kb downstream 4978 true Tp57577_TGAC_v2_scaf_546: 57328-62305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_546: 57328-57827 Trifolium pratense
Tp57577_TGAC_v2_gene7614 1.0kb upstream 1.0kb upstream 5478 true Tp57577_TGAC_v2_scaf_546: 57828-63305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_546: 62306-63305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 1.0kb downstream 1.0kb downstream 5478 true Tp57577_TGAC_v2_scaf_546: 56828-62305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_546: 56828-57827 Trifolium pratense
Tp57577_TGAC_v2_gene7614 2.0kb upstream 2.0kb upstream 6478 true Tp57577_TGAC_v2_scaf_546: 57828-64305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_546: 62306-64305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 2.0kb downstream 2.0kb downstream 6478 true Tp57577_TGAC_v2_scaf_546: 55828-62305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_546: 55828-57827 Trifolium pratense
Tp57577_TGAC_v2_gene7614 5.0kb upstream 5.0kb upstream 9478 true Tp57577_TGAC_v2_scaf_546: 57828-67305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_546: 62306-67305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 5.0kb downstream 5.0kb downstream 9478 true Tp57577_TGAC_v2_scaf_546: 52828-62305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_546: 52828-57827 Trifolium pratense
Tp57577_TGAC_v2_gene7614 10.0kb upstream 10.0kb upstream 14478 true Tp57577_TGAC_v2_scaf_546: 57828-72305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_546: 62306-72305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 10.0kb downstream 10.0kb downstream 14478 true Tp57577_TGAC_v2_scaf_546: 47828-62305 Trifolium pratense
Tp57577_TGAC_v2_gene7614 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_546: 47828-57827 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311646 5265 Fabidae View MSA
124068490 5270 Rosid View MSA
123736856 5271 Pentapetalae View MSA
122790484 5272 Eudicot View MSA
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain