Gene : Tp57577_TGAC_v2_gene9889 T. pratense v2
Defline:  (1 of 5) K01674 - carbonic anhydrase (cah) Genomic Order:  11
Name:  ? Tp57577_TGAC_v2_gene9889 Secondary Identifier:  ? PAC:35981612
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CYANCAT-PWY Trifolium pratense pathologic  
Tpratense PWY-241 Trifolium pratense pathologic  
Tpratense PWY-7115 Trifolium pratense pathologic  
Tpratense PWY-7117 Trifolium pratense pathologic  
Tpratense PWYQT-4429 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9889 0.5kb upstream 0.5kb upstream 4396 true Tp57577_TGAC_v2_scaf_500: 74810-79205 Trifolium pratense
Tp57577_TGAC_v2_gene9889 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_500: 78706-79205 Trifolium pratense
Tp57577_TGAC_v2_gene9889 0.5kb downstream 0.5kb downstream 4396 true Tp57577_TGAC_v2_scaf_500: 74310-78705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_500: 74310-74809 Trifolium pratense
Tp57577_TGAC_v2_gene9889 1.0kb upstream 1.0kb upstream 4896 true Tp57577_TGAC_v2_scaf_500: 74810-79705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_500: 78706-79705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 1.0kb downstream 1.0kb downstream 4896 true Tp57577_TGAC_v2_scaf_500: 73810-78705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_500: 73810-74809 Trifolium pratense
Tp57577_TGAC_v2_gene9889 2.0kb upstream 2.0kb upstream 5896 true Tp57577_TGAC_v2_scaf_500: 74810-80705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_500: 78706-80705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 2.0kb downstream 2.0kb downstream 5896 true Tp57577_TGAC_v2_scaf_500: 72810-78705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_500: 72810-74809 Trifolium pratense
Tp57577_TGAC_v2_gene9889 5.0kb upstream 5.0kb upstream 8896 true Tp57577_TGAC_v2_scaf_500: 74810-83705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_500: 78706-83705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 5.0kb downstream 5.0kb downstream 8896 true Tp57577_TGAC_v2_scaf_500: 69810-78705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_500: 69810-74809 Trifolium pratense
Tp57577_TGAC_v2_gene9889 10.0kb upstream 10.0kb upstream 13896 true Tp57577_TGAC_v2_scaf_500: 74810-88705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_500: 78706-88705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 10.0kb downstream 10.0kb downstream 13896 true Tp57577_TGAC_v2_scaf_500: 64810-78705 Trifolium pratense
Tp57577_TGAC_v2_gene9889 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_500: 64810-74809 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301331 5265 Fabidae View MSA
124069270 5270 Rosid View MSA
123746291 5271 Pentapetalae View MSA
122797456 5272 Eudicot View MSA
122049694 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain