Gene : Tp57577_TGAC_v2_gene19249 T. pratense v2
Defline:  (1 of 1) PTHR11592:SF33 - GLUTATHIONE PEROXIDASE 2-RELATED Genomic Order:  14
Name:  ? Tp57577_TGAC_v2_gene19249 Secondary Identifier:  ? PAC:35961624
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-4081 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19249 0.5kb upstream 0.5kb upstream 3620 true Tp57577_TGAC_v2_scaf_348: 82136-85755 Trifolium pratense
Tp57577_TGAC_v2_gene19249 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_348: 85256-85755 Trifolium pratense
Tp57577_TGAC_v2_gene19249 0.5kb downstream 0.5kb downstream 3620 true Tp57577_TGAC_v2_scaf_348: 81636-85255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_348: 81636-82135 Trifolium pratense
Tp57577_TGAC_v2_gene19249 1.0kb upstream 1.0kb upstream 4120 true Tp57577_TGAC_v2_scaf_348: 82136-86255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_348: 85256-86255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 1.0kb downstream 1.0kb downstream 4120 true Tp57577_TGAC_v2_scaf_348: 81136-85255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_348: 81136-82135 Trifolium pratense
Tp57577_TGAC_v2_gene19249 2.0kb upstream 2.0kb upstream 5120 true Tp57577_TGAC_v2_scaf_348: 82136-87255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_348: 85256-87255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 2.0kb downstream 2.0kb downstream 5120 true Tp57577_TGAC_v2_scaf_348: 80136-85255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_348: 80136-82135 Trifolium pratense
Tp57577_TGAC_v2_gene19249 5.0kb upstream 5.0kb upstream 8120 true Tp57577_TGAC_v2_scaf_348: 82136-90255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_348: 85256-90255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 5.0kb downstream 5.0kb downstream 8120 true Tp57577_TGAC_v2_scaf_348: 77136-85255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_348: 77136-82135 Trifolium pratense
Tp57577_TGAC_v2_gene19249 10.0kb upstream 10.0kb upstream 13120 true Tp57577_TGAC_v2_scaf_348: 82136-95255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_348: 85256-95255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 10.0kb downstream 10.0kb downstream 13120 true Tp57577_TGAC_v2_scaf_348: 72136-85255 Trifolium pratense
Tp57577_TGAC_v2_gene19249 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_348: 72136-82135 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300994 5265 Fabidae View MSA
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain