Gene : Tp57577_TGAC_v2_gene19354 T. pratense v2
Defline:  (1 of 2) 2.6.1.45 - Serine--glyoxylate transaminase / SGAT Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene19354 Secondary Identifier:  ? PAC:35968628
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLYSYN-ALA-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19354 0.5kb upstream 0.5kb upstream 4185 true Tp57577_TGAC_v2_scaf_332: 27606-31790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_332: 27606-28105 Trifolium pratense
Tp57577_TGAC_v2_gene19354 0.5kb downstream 0.5kb downstream 4185 true Tp57577_TGAC_v2_scaf_332: 28106-32290 Trifolium pratense
Tp57577_TGAC_v2_gene19354 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_332: 31791-32290 Trifolium pratense
Tp57577_TGAC_v2_gene19354 1.0kb upstream 1.0kb upstream 4685 true Tp57577_TGAC_v2_scaf_332: 27106-31790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_332: 27106-28105 Trifolium pratense
Tp57577_TGAC_v2_gene19354 1.0kb downstream 1.0kb downstream 4685 true Tp57577_TGAC_v2_scaf_332: 28106-32790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_332: 31791-32790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 2.0kb upstream 2.0kb upstream 5685 true Tp57577_TGAC_v2_scaf_332: 26106-31790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_332: 26106-28105 Trifolium pratense
Tp57577_TGAC_v2_gene19354 2.0kb downstream 2.0kb downstream 5685 true Tp57577_TGAC_v2_scaf_332: 28106-33790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_332: 31791-33790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 5.0kb upstream 5.0kb upstream 8685 true Tp57577_TGAC_v2_scaf_332: 23106-31790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_332: 23106-28105 Trifolium pratense
Tp57577_TGAC_v2_gene19354 5.0kb downstream 5.0kb downstream 8685 true Tp57577_TGAC_v2_scaf_332: 28106-36790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_332: 31791-36790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 10.0kb upstream 10.0kb upstream 13685 true Tp57577_TGAC_v2_scaf_332: 18106-31790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_332: 18106-28105 Trifolium pratense
Tp57577_TGAC_v2_gene19354 10.0kb downstream 10.0kb downstream 13685 true Tp57577_TGAC_v2_scaf_332: 28106-41790 Trifolium pratense
Tp57577_TGAC_v2_gene19354 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_332: 31791-41790 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301665 5265 Fabidae View MSA
124065045 5270 Rosid View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain