Gene : Tp57577_TGAC_v2_gene18930 T. pratense v2
Defline:  (1 of 2) PTHR30546:SF3 - MINOR ALLERGEN Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene18930 Secondary Identifier:  ? PAC:35973581
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7279 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18930 0.5kb upstream 0.5kb upstream 3013 true Tp57577_TGAC_v2_scaf_3255: 303-3315 Trifolium pratense
Tp57577_TGAC_v2_gene18930 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_3255: 2816-3315 Trifolium pratense
Tp57577_TGAC_v2_gene18930 0.5kb downstream 0.5kb downstream 2815 true Tp57577_TGAC_v2_scaf_3255: 1-2815 Trifolium pratense
Tp57577_TGAC_v2_gene18930 0.5kb downstream 0.5kb downstream 302 false Tp57577_TGAC_v2_scaf_3255: 1-302 Trifolium pratense
Tp57577_TGAC_v2_gene18930 1.0kb upstream 1.0kb upstream 3513 true Tp57577_TGAC_v2_scaf_3255: 303-3815 Trifolium pratense
Tp57577_TGAC_v2_gene18930 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_3255: 2816-3815 Trifolium pratense
Tp57577_TGAC_v2_gene18930 1.0kb downstream 1.0kb downstream 2815 true Tp57577_TGAC_v2_scaf_3255: 1-2815 Trifolium pratense
Tp57577_TGAC_v2_gene18930 1.0kb downstream 1.0kb downstream 302 false Tp57577_TGAC_v2_scaf_3255: 1-302 Trifolium pratense
Tp57577_TGAC_v2_gene18930 2.0kb upstream 2.0kb upstream 3614 true Tp57577_TGAC_v2_scaf_3255: 303-3916 Trifolium pratense
Tp57577_TGAC_v2_gene18930 2.0kb upstream 2.0kb upstream 1101 false Tp57577_TGAC_v2_scaf_3255: 2816-3916 Trifolium pratense
Tp57577_TGAC_v2_gene18930 2.0kb downstream 2.0kb downstream 2815 true Tp57577_TGAC_v2_scaf_3255: 1-2815 Trifolium pratense
Tp57577_TGAC_v2_gene18930 2.0kb downstream 2.0kb downstream 302 false Tp57577_TGAC_v2_scaf_3255: 1-302 Trifolium pratense
Tp57577_TGAC_v2_gene18930 5.0kb upstream 5.0kb upstream 3614 true Tp57577_TGAC_v2_scaf_3255: 303-3916 Trifolium pratense
Tp57577_TGAC_v2_gene18930 5.0kb upstream 5.0kb upstream 1101 false Tp57577_TGAC_v2_scaf_3255: 2816-3916 Trifolium pratense
Tp57577_TGAC_v2_gene18930 5.0kb downstream 5.0kb downstream 2815 true Tp57577_TGAC_v2_scaf_3255: 1-2815 Trifolium pratense
Tp57577_TGAC_v2_gene18930 5.0kb downstream 5.0kb downstream 302 false Tp57577_TGAC_v2_scaf_3255: 1-302 Trifolium pratense
Tp57577_TGAC_v2_gene18930 10.0kb upstream 10.0kb upstream 3614 true Tp57577_TGAC_v2_scaf_3255: 303-3916 Trifolium pratense
Tp57577_TGAC_v2_gene18930 10.0kb upstream 10.0kb upstream 1101 false Tp57577_TGAC_v2_scaf_3255: 2816-3916 Trifolium pratense
Tp57577_TGAC_v2_gene18930 10.0kb downstream 10.0kb downstream 2815 true Tp57577_TGAC_v2_scaf_3255: 1-2815 Trifolium pratense
Tp57577_TGAC_v2_gene18930 10.0kb downstream 10.0kb downstream 302 false Tp57577_TGAC_v2_scaf_3255: 1-302 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313825 5265 Fabidae View MSA
124071872 5270 Rosid View MSA
123747296 5271 Pentapetalae View MSA
122787276 5272 Eudicot View MSA
122042695 5273 Angiosperm View MSA
121346048 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain