Gene : Tp57577_TGAC_v2_gene6090 T. pratense v2
Defline:  (1 of 1) PTHR10906:SF9 - PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC Genomic Order:  635
Name:  ? Tp57577_TGAC_v2_gene6090 Secondary Identifier:  ? PAC:35978771
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6090 0.5kb upstream 0.5kb upstream 4417 true Tp57577_TGAC_v2_LG1: 4881990-4886406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 4881990-4882489 Trifolium pratense
Tp57577_TGAC_v2_gene6090 0.5kb downstream 0.5kb downstream 4417 true Tp57577_TGAC_v2_LG1: 4882490-4886906 Trifolium pratense
Tp57577_TGAC_v2_gene6090 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 4886407-4886906 Trifolium pratense
Tp57577_TGAC_v2_gene6090 1.0kb upstream 1.0kb upstream 4917 true Tp57577_TGAC_v2_LG1: 4881490-4886406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 4881490-4882489 Trifolium pratense
Tp57577_TGAC_v2_gene6090 1.0kb downstream 1.0kb downstream 4917 true Tp57577_TGAC_v2_LG1: 4882490-4887406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 4886407-4887406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 2.0kb upstream 2.0kb upstream 5917 true Tp57577_TGAC_v2_LG1: 4880490-4886406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 4880490-4882489 Trifolium pratense
Tp57577_TGAC_v2_gene6090 2.0kb downstream 2.0kb downstream 5917 true Tp57577_TGAC_v2_LG1: 4882490-4888406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 4886407-4888406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 5.0kb upstream 5.0kb upstream 8917 true Tp57577_TGAC_v2_LG1: 4877490-4886406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 4877490-4882489 Trifolium pratense
Tp57577_TGAC_v2_gene6090 5.0kb downstream 5.0kb downstream 8917 true Tp57577_TGAC_v2_LG1: 4882490-4891406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 4886407-4891406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 10.0kb upstream 10.0kb upstream 13917 true Tp57577_TGAC_v2_LG1: 4872490-4886406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 4872490-4882489 Trifolium pratense
Tp57577_TGAC_v2_gene6090 10.0kb downstream 10.0kb downstream 13917 true Tp57577_TGAC_v2_LG1: 4882490-4896406 Trifolium pratense
Tp57577_TGAC_v2_gene6090 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 4886407-4896406 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307016 5265 Fabidae View MSA
124063230 5270 Rosid View MSA
123738518 5271 Pentapetalae View MSA
122788956 5272 Eudicot View MSA
122046659 5273 Angiosperm View MSA
121346087 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain