Gene : Tp57577_TGAC_v2_gene6074 T. pratense v2
Defline:  (1 of 1) PTHR22763:SF39 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Genomic Order:  652
Name:  ? Tp57577_TGAC_v2_gene6074 Secondary Identifier:  ? PAC:35978984
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6074 0.5kb upstream 0.5kb upstream 1749 true Tp57577_TGAC_v2_LG1: 5095311-5097059 Trifolium pratense
Tp57577_TGAC_v2_gene6074 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 5096560-5097059 Trifolium pratense
Tp57577_TGAC_v2_gene6074 0.5kb downstream 0.5kb downstream 1749 true Tp57577_TGAC_v2_LG1: 5094811-5096559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 5094811-5095310 Trifolium pratense
Tp57577_TGAC_v2_gene6074 1.0kb upstream 1.0kb upstream 2249 true Tp57577_TGAC_v2_LG1: 5095311-5097559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 5096560-5097559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 1.0kb downstream 1.0kb downstream 2249 true Tp57577_TGAC_v2_LG1: 5094311-5096559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 5094311-5095310 Trifolium pratense
Tp57577_TGAC_v2_gene6074 2.0kb upstream 2.0kb upstream 3249 true Tp57577_TGAC_v2_LG1: 5095311-5098559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 5096560-5098559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 2.0kb downstream 2.0kb downstream 3249 true Tp57577_TGAC_v2_LG1: 5093311-5096559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 5093311-5095310 Trifolium pratense
Tp57577_TGAC_v2_gene6074 5.0kb upstream 5.0kb upstream 6249 true Tp57577_TGAC_v2_LG1: 5095311-5101559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 5096560-5101559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 5.0kb downstream 5.0kb downstream 6249 true Tp57577_TGAC_v2_LG1: 5090311-5096559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 5090311-5095310 Trifolium pratense
Tp57577_TGAC_v2_gene6074 10.0kb upstream 10.0kb upstream 11249 true Tp57577_TGAC_v2_LG1: 5095311-5106559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 5096560-5106559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 10.0kb downstream 10.0kb downstream 11249 true Tp57577_TGAC_v2_LG1: 5085311-5096559 Trifolium pratense
Tp57577_TGAC_v2_gene6074 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 5085311-5095310 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309509 5265 Fabidae View MSA
124061654 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain