Gene : Tp57577_TGAC_v2_gene26578 T. pratense v2
Defline:  (1 of 1) PTHR14237:SF30 - MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene26578 Secondary Identifier:  ? PAC:35968736
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5963 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26578 0.5kb upstream 0.5kb upstream 5273 true Tp57577_TGAC_v2_scaf_906: 64036-69308 Trifolium pratense
Tp57577_TGAC_v2_gene26578 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_906: 64036-64535 Trifolium pratense
Tp57577_TGAC_v2_gene26578 0.5kb downstream 0.5kb downstream 5273 true Tp57577_TGAC_v2_scaf_906: 64536-69808 Trifolium pratense
Tp57577_TGAC_v2_gene26578 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_906: 69309-69808 Trifolium pratense
Tp57577_TGAC_v2_gene26578 1.0kb upstream 1.0kb upstream 5773 true Tp57577_TGAC_v2_scaf_906: 63536-69308 Trifolium pratense
Tp57577_TGAC_v2_gene26578 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_906: 63536-64535 Trifolium pratense
Tp57577_TGAC_v2_gene26578 1.0kb downstream 1.0kb downstream 5773 true Tp57577_TGAC_v2_scaf_906: 64536-70308 Trifolium pratense
Tp57577_TGAC_v2_gene26578 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_906: 69309-70308 Trifolium pratense
Tp57577_TGAC_v2_gene26578 2.0kb upstream 2.0kb upstream 6773 true Tp57577_TGAC_v2_scaf_906: 62536-69308 Trifolium pratense
Tp57577_TGAC_v2_gene26578 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_906: 62536-64535 Trifolium pratense
Tp57577_TGAC_v2_gene26578 2.0kb downstream 2.0kb downstream 6773 true Tp57577_TGAC_v2_scaf_906: 64536-71308 Trifolium pratense
Tp57577_TGAC_v2_gene26578 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_906: 69309-71308 Trifolium pratense
Tp57577_TGAC_v2_gene26578 5.0kb upstream 5.0kb upstream 9773 true Tp57577_TGAC_v2_scaf_906: 59536-69308 Trifolium pratense
Tp57577_TGAC_v2_gene26578 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_906: 59536-64535 Trifolium pratense
Tp57577_TGAC_v2_gene26578 5.0kb downstream 5.0kb downstream 9773 true Tp57577_TGAC_v2_scaf_906: 64536-74308 Trifolium pratense
Tp57577_TGAC_v2_gene26578 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_906: 69309-74308 Trifolium pratense
Tp57577_TGAC_v2_gene26578 10.0kb upstream 10.0kb upstream 14773 true Tp57577_TGAC_v2_scaf_906: 54536-69308 Trifolium pratense
Tp57577_TGAC_v2_gene26578 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_906: 54536-64535 Trifolium pratense
Tp57577_TGAC_v2_gene26578 10.0kb downstream 10.0kb downstream 14156 true Tp57577_TGAC_v2_scaf_906: 64536-78691 Trifolium pratense
Tp57577_TGAC_v2_gene26578 10.0kb downstream 10.0kb downstream 9383 false Tp57577_TGAC_v2_scaf_906: 69309-78691 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311659 5265 Fabidae View MSA
124065334 5270 Rosid View MSA
123736927 5271 Pentapetalae View MSA
122792643 5272 Eudicot View MSA
122043484 5273 Angiosperm View MSA
123428941 5275 Viridiplantae View MSA
121347613 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain