Gene : Tp57577_TGAC_v2_gene22708 T. pratense v2
Defline:  (1 of 1) PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene22708 Secondary Identifier:  ? PAC:35966952
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6441 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22708 0.5kb upstream 0.5kb upstream 6115 true Tp57577_TGAC_v2_scaf_977: 33468-39582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_977: 33468-33967 Trifolium pratense
Tp57577_TGAC_v2_gene22708 0.5kb downstream 0.5kb downstream 6115 true Tp57577_TGAC_v2_scaf_977: 33968-40082 Trifolium pratense
Tp57577_TGAC_v2_gene22708 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_977: 39583-40082 Trifolium pratense
Tp57577_TGAC_v2_gene22708 1.0kb upstream 1.0kb upstream 6615 true Tp57577_TGAC_v2_scaf_977: 32968-39582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_977: 32968-33967 Trifolium pratense
Tp57577_TGAC_v2_gene22708 1.0kb downstream 1.0kb downstream 6615 true Tp57577_TGAC_v2_scaf_977: 33968-40582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_977: 39583-40582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 2.0kb upstream 2.0kb upstream 7615 true Tp57577_TGAC_v2_scaf_977: 31968-39582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_977: 31968-33967 Trifolium pratense
Tp57577_TGAC_v2_gene22708 2.0kb downstream 2.0kb downstream 7615 true Tp57577_TGAC_v2_scaf_977: 33968-41582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_977: 39583-41582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 5.0kb upstream 5.0kb upstream 10615 true Tp57577_TGAC_v2_scaf_977: 28968-39582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_977: 28968-33967 Trifolium pratense
Tp57577_TGAC_v2_gene22708 5.0kb downstream 5.0kb downstream 10615 true Tp57577_TGAC_v2_scaf_977: 33968-44582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_977: 39583-44582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 10.0kb upstream 10.0kb upstream 15615 true Tp57577_TGAC_v2_scaf_977: 23968-39582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_977: 23968-33967 Trifolium pratense
Tp57577_TGAC_v2_gene22708 10.0kb downstream 10.0kb downstream 15615 true Tp57577_TGAC_v2_scaf_977: 33968-49582 Trifolium pratense
Tp57577_TGAC_v2_gene22708 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_977: 39583-49582 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300122 5265 Fabidae View MSA
124068541 5270 Rosid View MSA
123736657 5271 Pentapetalae View MSA
122791898 5272 Eudicot View MSA
122046966 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain