Gene : Tp57577_TGAC_v2_gene30542 T. pratense v2
Defline:  (1 of 2) PTHR18934:SF140 - HELICASE , IBR AND ZINC FINGER PROTEIN DOMAIN-CONTAINING PROTEIN Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene30542 Secondary Identifier:  ? PAC:35986414
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30542 0.5kb upstream 0.5kb upstream 7997 true Tp57577_TGAC_v2_scaf_493: 21636-29632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_493: 21636-22135 Trifolium pratense
Tp57577_TGAC_v2_gene30542 0.5kb downstream 0.5kb downstream 7997 true Tp57577_TGAC_v2_scaf_493: 22136-30132 Trifolium pratense
Tp57577_TGAC_v2_gene30542 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_493: 29633-30132 Trifolium pratense
Tp57577_TGAC_v2_gene30542 1.0kb upstream 1.0kb upstream 8497 true Tp57577_TGAC_v2_scaf_493: 21136-29632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_493: 21136-22135 Trifolium pratense
Tp57577_TGAC_v2_gene30542 1.0kb downstream 1.0kb downstream 8497 true Tp57577_TGAC_v2_scaf_493: 22136-30632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_493: 29633-30632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 2.0kb upstream 2.0kb upstream 9497 true Tp57577_TGAC_v2_scaf_493: 20136-29632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_493: 20136-22135 Trifolium pratense
Tp57577_TGAC_v2_gene30542 2.0kb downstream 2.0kb downstream 9497 true Tp57577_TGAC_v2_scaf_493: 22136-31632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_493: 29633-31632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 5.0kb upstream 5.0kb upstream 12497 true Tp57577_TGAC_v2_scaf_493: 17136-29632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_493: 17136-22135 Trifolium pratense
Tp57577_TGAC_v2_gene30542 5.0kb downstream 5.0kb downstream 12497 true Tp57577_TGAC_v2_scaf_493: 22136-34632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_493: 29633-34632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 10.0kb upstream 10.0kb upstream 17497 true Tp57577_TGAC_v2_scaf_493: 12136-29632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_493: 12136-22135 Trifolium pratense
Tp57577_TGAC_v2_gene30542 10.0kb downstream 10.0kb downstream 17497 true Tp57577_TGAC_v2_scaf_493: 22136-39632 Trifolium pratense
Tp57577_TGAC_v2_gene30542 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_493: 29633-39632 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303749 5265 Fabidae View MSA
124065250 5270 Rosid View MSA
123737649 5271 Pentapetalae View MSA
122792677 5272 Eudicot View MSA
122041869 5273 Angiosperm View MSA
121309896 5274 Embryophyte View MSA
123347530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain