Gene : Tp57577_TGAC_v2_gene30538 T. pratense v2

Genomic Order:  11 Name:  ? Tp57577_TGAC_v2_gene30538
Secondary Identifier:  ? PAC:35986407

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30538 0.5kb upstream 0.5kb upstream 5022 true Tp57577_TGAC_v2_scaf_493: 79861-84882 Trifolium pratense
Tp57577_TGAC_v2_gene30538 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_493: 84383-84882 Trifolium pratense
Tp57577_TGAC_v2_gene30538 0.5kb downstream 0.5kb downstream 5022 true Tp57577_TGAC_v2_scaf_493: 79361-84382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_493: 79361-79860 Trifolium pratense
Tp57577_TGAC_v2_gene30538 1.0kb upstream 1.0kb upstream 5522 true Tp57577_TGAC_v2_scaf_493: 79861-85382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_493: 84383-85382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 1.0kb downstream 1.0kb downstream 5522 true Tp57577_TGAC_v2_scaf_493: 78861-84382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_493: 78861-79860 Trifolium pratense
Tp57577_TGAC_v2_gene30538 2.0kb upstream 2.0kb upstream 6522 true Tp57577_TGAC_v2_scaf_493: 79861-86382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_493: 84383-86382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 2.0kb downstream 2.0kb downstream 6522 true Tp57577_TGAC_v2_scaf_493: 77861-84382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_493: 77861-79860 Trifolium pratense
Tp57577_TGAC_v2_gene30538 5.0kb upstream 5.0kb upstream 9522 true Tp57577_TGAC_v2_scaf_493: 79861-89382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_493: 84383-89382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 5.0kb downstream 5.0kb downstream 9522 true Tp57577_TGAC_v2_scaf_493: 74861-84382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_493: 74861-79860 Trifolium pratense
Tp57577_TGAC_v2_gene30538 10.0kb upstream 10.0kb upstream 14522 true Tp57577_TGAC_v2_scaf_493: 79861-94382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_493: 84383-94382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 10.0kb downstream 10.0kb downstream 14522 true Tp57577_TGAC_v2_scaf_493: 69861-84382 Trifolium pratense
Tp57577_TGAC_v2_gene30538 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_493: 69861-79860 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309405 5265 Fabidae View MSA
124050285 5270 Rosid View MSA
123736936 5271 Pentapetalae View MSA
122789247 5272 Eudicot View MSA
122044217 5273 Angiosperm View MSA
121310256 5274 Embryophyte View MSA
123347795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain