Gene : Tp57577_TGAC_v2_gene27887 T. pratense v2
Defline:  (1 of 3) PTHR23409 - RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene27887 Secondary Identifier:  ? PAC:35952058
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6126 Trifolium pratense pathologic  
Tpratense PWY-6545 Trifolium pratense pathologic  
Tpratense PWY-7184 Trifolium pratense pathologic  
Tpratense PWY-7210 Trifolium pratense pathologic  
Tpratense PWY-7211 Trifolium pratense pathologic  
Tpratense PWY-7220 Trifolium pratense pathologic  
Tpratense PWY-7222 Trifolium pratense pathologic  
Tpratense PWY-7226 Trifolium pratense pathologic  
Tpratense PWY-7227 Trifolium pratense pathologic  
Tpratense PWY-7228 Trifolium pratense pathologic  
Tpratense PWY-7229 Trifolium pratense pathologic  
Tpratense PWY-841 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27887 0.5kb upstream 0.5kb upstream 1495 true Tp57577_TGAC_v2_scaf_848: 33876-35370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_848: 33876-34375 Trifolium pratense
Tp57577_TGAC_v2_gene27887 0.5kb downstream 0.5kb downstream 1495 true Tp57577_TGAC_v2_scaf_848: 34376-35870 Trifolium pratense
Tp57577_TGAC_v2_gene27887 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_848: 35371-35870 Trifolium pratense
Tp57577_TGAC_v2_gene27887 1.0kb upstream 1.0kb upstream 1995 true Tp57577_TGAC_v2_scaf_848: 33376-35370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_848: 33376-34375 Trifolium pratense
Tp57577_TGAC_v2_gene27887 1.0kb downstream 1.0kb downstream 1995 true Tp57577_TGAC_v2_scaf_848: 34376-36370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_848: 35371-36370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 2.0kb upstream 2.0kb upstream 2995 true Tp57577_TGAC_v2_scaf_848: 32376-35370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_848: 32376-34375 Trifolium pratense
Tp57577_TGAC_v2_gene27887 2.0kb downstream 2.0kb downstream 2995 true Tp57577_TGAC_v2_scaf_848: 34376-37370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_848: 35371-37370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 5.0kb upstream 5.0kb upstream 5995 true Tp57577_TGAC_v2_scaf_848: 29376-35370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_848: 29376-34375 Trifolium pratense
Tp57577_TGAC_v2_gene27887 5.0kb downstream 5.0kb downstream 5995 true Tp57577_TGAC_v2_scaf_848: 34376-40370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_848: 35371-40370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 10.0kb upstream 10.0kb upstream 10995 true Tp57577_TGAC_v2_scaf_848: 24376-35370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_848: 24376-34375 Trifolium pratense
Tp57577_TGAC_v2_gene27887 10.0kb downstream 10.0kb downstream 10995 true Tp57577_TGAC_v2_scaf_848: 34376-45370 Trifolium pratense
Tp57577_TGAC_v2_gene27887 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_848: 35371-45370 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309353 5265 Fabidae View MSA
124067883 5270 Rosid View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain