Gene : Tp57577_TGAC_v2_gene31797 T. pratense v2
Defline:  (1 of 1) PTHR11709:SF68 - LACCASE-13-RELATED Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene31797 Secondary Identifier:  ? PAC:35985497
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5466 Trifolium pratense pathologic  
Tpratense PWY-6824 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene31797 0.5kb upstream 0.5kb upstream 4301 true Tp57577_TGAC_v2_scaf_707: 62925-67225 Trifolium pratense
Tp57577_TGAC_v2_gene31797 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_707: 66726-67225 Trifolium pratense
Tp57577_TGAC_v2_gene31797 0.5kb downstream 0.5kb downstream 4301 true Tp57577_TGAC_v2_scaf_707: 62425-66725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_707: 62425-62924 Trifolium pratense
Tp57577_TGAC_v2_gene31797 1.0kb upstream 1.0kb upstream 4801 true Tp57577_TGAC_v2_scaf_707: 62925-67725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_707: 66726-67725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 1.0kb downstream 1.0kb downstream 4801 true Tp57577_TGAC_v2_scaf_707: 61925-66725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_707: 61925-62924 Trifolium pratense
Tp57577_TGAC_v2_gene31797 2.0kb upstream 2.0kb upstream 5801 true Tp57577_TGAC_v2_scaf_707: 62925-68725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_707: 66726-68725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 2.0kb downstream 2.0kb downstream 5801 true Tp57577_TGAC_v2_scaf_707: 60925-66725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_707: 60925-62924 Trifolium pratense
Tp57577_TGAC_v2_gene31797 5.0kb upstream 5.0kb upstream 8801 true Tp57577_TGAC_v2_scaf_707: 62925-71725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_707: 66726-71725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 5.0kb downstream 5.0kb downstream 8801 true Tp57577_TGAC_v2_scaf_707: 57925-66725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_707: 57925-62924 Trifolium pratense
Tp57577_TGAC_v2_gene31797 10.0kb upstream 10.0kb upstream 13801 true Tp57577_TGAC_v2_scaf_707: 62925-76725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_707: 66726-76725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 10.0kb downstream 10.0kb downstream 13801 true Tp57577_TGAC_v2_scaf_707: 52925-66725 Trifolium pratense
Tp57577_TGAC_v2_gene31797 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_707: 52925-62924 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123752293 5271 Pentapetalae View MSA
122312602 5265 Fabidae View MSA
124075203 5270 Rosid View MSA
122774464 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain