Gene : Tp57577_TGAC_v2_gene27983 T. pratense v2
Defline:  (1 of 37) PF12776 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_3) Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene27983 Secondary Identifier:  ? PAC:35968295
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27983 0.5kb upstream 0.5kb upstream 9869 true Tp57577_TGAC_v2_scaf_879: 43857-53725 Trifolium pratense
Tp57577_TGAC_v2_gene27983 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_879: 53226-53725 Trifolium pratense
Tp57577_TGAC_v2_gene27983 0.5kb downstream 0.5kb downstream 9869 true Tp57577_TGAC_v2_scaf_879: 43357-53225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_879: 43357-43856 Trifolium pratense
Tp57577_TGAC_v2_gene27983 1.0kb upstream 1.0kb upstream 10369 true Tp57577_TGAC_v2_scaf_879: 43857-54225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_879: 53226-54225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 1.0kb downstream 1.0kb downstream 10369 true Tp57577_TGAC_v2_scaf_879: 42857-53225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_879: 42857-43856 Trifolium pratense
Tp57577_TGAC_v2_gene27983 2.0kb upstream 2.0kb upstream 11369 true Tp57577_TGAC_v2_scaf_879: 43857-55225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_879: 53226-55225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 2.0kb downstream 2.0kb downstream 11369 true Tp57577_TGAC_v2_scaf_879: 41857-53225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_879: 41857-43856 Trifolium pratense
Tp57577_TGAC_v2_gene27983 5.0kb upstream 5.0kb upstream 14369 true Tp57577_TGAC_v2_scaf_879: 43857-58225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_879: 53226-58225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 5.0kb downstream 5.0kb downstream 14369 true Tp57577_TGAC_v2_scaf_879: 38857-53225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_879: 38857-43856 Trifolium pratense
Tp57577_TGAC_v2_gene27983 10.0kb upstream 10.0kb upstream 19369 true Tp57577_TGAC_v2_scaf_879: 43857-63225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_879: 53226-63225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 10.0kb downstream 10.0kb downstream 19369 true Tp57577_TGAC_v2_scaf_879: 33857-53225 Trifolium pratense
Tp57577_TGAC_v2_gene27983 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_879: 33857-43856 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288017 5265 Fabidae View MSA
124028404 5270 Rosid View MSA
123753432 5271 Pentapetalae View MSA
122797499 5272 Eudicot View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain