Gene : Tp57577_TGAC_v2_gene9269 T. pratense v2
Defline:  (1 of 1) PTHR12775 - PROTEIN C20ORF43 HOMOLOG Genomic Order:  22
Name:  ? Tp57577_TGAC_v2_gene9269 Secondary Identifier:  ? PAC:35967861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9269 0.5kb upstream 0.5kb upstream 1971 true Tp57577_TGAC_v2_scaf_550: 158955-160925 Trifolium pratense
Tp57577_TGAC_v2_gene9269 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_550: 160426-160925 Trifolium pratense
Tp57577_TGAC_v2_gene9269 0.5kb downstream 0.5kb downstream 1971 true Tp57577_TGAC_v2_scaf_550: 158455-160425 Trifolium pratense
Tp57577_TGAC_v2_gene9269 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_550: 158455-158954 Trifolium pratense
Tp57577_TGAC_v2_gene9269 1.0kb upstream 1.0kb upstream 2471 true Tp57577_TGAC_v2_scaf_550: 158955-161425 Trifolium pratense
Tp57577_TGAC_v2_gene9269 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_550: 160426-161425 Trifolium pratense
Tp57577_TGAC_v2_gene9269 1.0kb downstream 1.0kb downstream 2471 true Tp57577_TGAC_v2_scaf_550: 157955-160425 Trifolium pratense
Tp57577_TGAC_v2_gene9269 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_550: 157955-158954 Trifolium pratense
Tp57577_TGAC_v2_gene9269 2.0kb upstream 2.0kb upstream 2552 true Tp57577_TGAC_v2_scaf_550: 158955-161506 Trifolium pratense
Tp57577_TGAC_v2_gene9269 2.0kb upstream 2.0kb upstream 1081 false Tp57577_TGAC_v2_scaf_550: 160426-161506 Trifolium pratense
Tp57577_TGAC_v2_gene9269 2.0kb downstream 2.0kb downstream 3471 true Tp57577_TGAC_v2_scaf_550: 156955-160425 Trifolium pratense
Tp57577_TGAC_v2_gene9269 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_550: 156955-158954 Trifolium pratense
Tp57577_TGAC_v2_gene9269 5.0kb upstream 5.0kb upstream 2552 true Tp57577_TGAC_v2_scaf_550: 158955-161506 Trifolium pratense
Tp57577_TGAC_v2_gene9269 5.0kb upstream 5.0kb upstream 1081 false Tp57577_TGAC_v2_scaf_550: 160426-161506 Trifolium pratense
Tp57577_TGAC_v2_gene9269 5.0kb downstream 5.0kb downstream 6471 true Tp57577_TGAC_v2_scaf_550: 153955-160425 Trifolium pratense
Tp57577_TGAC_v2_gene9269 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_550: 153955-158954 Trifolium pratense
Tp57577_TGAC_v2_gene9269 10.0kb upstream 10.0kb upstream 2552 true Tp57577_TGAC_v2_scaf_550: 158955-161506 Trifolium pratense
Tp57577_TGAC_v2_gene9269 10.0kb upstream 10.0kb upstream 1081 false Tp57577_TGAC_v2_scaf_550: 160426-161506 Trifolium pratense
Tp57577_TGAC_v2_gene9269 10.0kb downstream 10.0kb downstream 11471 true Tp57577_TGAC_v2_scaf_550: 148955-160425 Trifolium pratense
Tp57577_TGAC_v2_gene9269 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_550: 148955-158954 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308220 5265 Fabidae View MSA
124066786 5270 Rosid View MSA
123747269 5271 Pentapetalae View MSA
122787080 5272 Eudicot View MSA
122046209 5273 Angiosperm View MSA
121350063 5274 Embryophyte View MSA
123426844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain