Gene : Tp57577_TGAC_v2_gene22406 T. pratense v2
Defline:  (1 of 1) PF00560//PF11721 - Leucine Rich Repeat (LRR_1) // Di-glucose binding within endoplasmic reticulum (Malectin) Genomic Order:  4
Name:  ? Tp57577_TGAC_v2_gene22406 Secondary Identifier:  ? PAC:35967509
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22406 0.5kb upstream 0.5kb upstream 5737 true Tp57577_TGAC_v2_scaf_678: 30376-36112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_678: 30376-30875 Trifolium pratense
Tp57577_TGAC_v2_gene22406 0.5kb downstream 0.5kb downstream 5737 true Tp57577_TGAC_v2_scaf_678: 30876-36612 Trifolium pratense
Tp57577_TGAC_v2_gene22406 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_678: 36113-36612 Trifolium pratense
Tp57577_TGAC_v2_gene22406 1.0kb upstream 1.0kb upstream 6237 true Tp57577_TGAC_v2_scaf_678: 29876-36112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_678: 29876-30875 Trifolium pratense
Tp57577_TGAC_v2_gene22406 1.0kb downstream 1.0kb downstream 6237 true Tp57577_TGAC_v2_scaf_678: 30876-37112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_678: 36113-37112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 2.0kb upstream 2.0kb upstream 7237 true Tp57577_TGAC_v2_scaf_678: 28876-36112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_678: 28876-30875 Trifolium pratense
Tp57577_TGAC_v2_gene22406 2.0kb downstream 2.0kb downstream 7237 true Tp57577_TGAC_v2_scaf_678: 30876-38112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_678: 36113-38112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 5.0kb upstream 5.0kb upstream 10237 true Tp57577_TGAC_v2_scaf_678: 25876-36112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_678: 25876-30875 Trifolium pratense
Tp57577_TGAC_v2_gene22406 5.0kb downstream 5.0kb downstream 10237 true Tp57577_TGAC_v2_scaf_678: 30876-41112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_678: 36113-41112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 10.0kb upstream 10.0kb upstream 15237 true Tp57577_TGAC_v2_scaf_678: 20876-36112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_678: 20876-30875 Trifolium pratense
Tp57577_TGAC_v2_gene22406 10.0kb downstream 10.0kb downstream 15237 true Tp57577_TGAC_v2_scaf_678: 30876-46112 Trifolium pratense
Tp57577_TGAC_v2_gene22406 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_678: 36113-46112 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305609 5265 Fabidae View MSA
124063346 5270 Rosid View MSA
123750625 5271 Pentapetalae View MSA
122787899 5272 Eudicot View MSA
122042080 5273 Angiosperm View MSA
121348136 5274 Embryophyte View MSA
123380739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain