Gene : Tp57577_TGAC_v2_gene13504 T. pratense v2
Defline:  (1 of 59) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  21
Name:  ? Tp57577_TGAC_v2_gene13504 Secondary Identifier:  ? PAC:35991580
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13504 0.5kb upstream 0.5kb upstream 7600 true Tp57577_TGAC_v2_scaf_407: 135766-143365 Trifolium pratense
Tp57577_TGAC_v2_gene13504 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_407: 142866-143365 Trifolium pratense
Tp57577_TGAC_v2_gene13504 0.5kb downstream 0.5kb downstream 7600 true Tp57577_TGAC_v2_scaf_407: 135266-142865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_407: 135266-135765 Trifolium pratense
Tp57577_TGAC_v2_gene13504 1.0kb upstream 1.0kb upstream 8100 true Tp57577_TGAC_v2_scaf_407: 135766-143865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_407: 142866-143865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 1.0kb downstream 1.0kb downstream 8100 true Tp57577_TGAC_v2_scaf_407: 134766-142865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_407: 134766-135765 Trifolium pratense
Tp57577_TGAC_v2_gene13504 2.0kb upstream 2.0kb upstream 9100 true Tp57577_TGAC_v2_scaf_407: 135766-144865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_407: 142866-144865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 2.0kb downstream 2.0kb downstream 9100 true Tp57577_TGAC_v2_scaf_407: 133766-142865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_407: 133766-135765 Trifolium pratense
Tp57577_TGAC_v2_gene13504 5.0kb upstream 5.0kb upstream 12100 true Tp57577_TGAC_v2_scaf_407: 135766-147865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_407: 142866-147865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 5.0kb downstream 5.0kb downstream 12100 true Tp57577_TGAC_v2_scaf_407: 130766-142865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_407: 130766-135765 Trifolium pratense
Tp57577_TGAC_v2_gene13504 10.0kb upstream 10.0kb upstream 17100 true Tp57577_TGAC_v2_scaf_407: 135766-152865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_407: 142866-152865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 10.0kb downstream 10.0kb downstream 17100 true Tp57577_TGAC_v2_scaf_407: 125766-142865 Trifolium pratense
Tp57577_TGAC_v2_gene13504 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_407: 125766-135765 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299753 5265 Fabidae View MSA
124064804 5270 Rosid View MSA
123740477 5271 Pentapetalae View MSA
122791642 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain