Gene : Tp57577_TGAC_v2_gene23186 T. pratense v2
Defline:  (1 of 2) K00705 - 4-alpha-glucanotransferase (malQ) Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene23186 Secondary Identifier:  ? PAC:35958803
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6724 Trifolium pratense pathologic  
Tpratense PWY-7238 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23186 0.5kb upstream 0.5kb upstream 8666 true Tp57577_TGAC_v2_scaf_981: 47180-55845 Trifolium pratense
Tp57577_TGAC_v2_gene23186 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_981: 55346-55845 Trifolium pratense
Tp57577_TGAC_v2_gene23186 0.5kb downstream 0.5kb downstream 8666 true Tp57577_TGAC_v2_scaf_981: 46680-55345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_981: 46680-47179 Trifolium pratense
Tp57577_TGAC_v2_gene23186 1.0kb upstream 1.0kb upstream 9166 true Tp57577_TGAC_v2_scaf_981: 47180-56345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_981: 55346-56345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 1.0kb downstream 1.0kb downstream 9166 true Tp57577_TGAC_v2_scaf_981: 46180-55345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_981: 46180-47179 Trifolium pratense
Tp57577_TGAC_v2_gene23186 2.0kb upstream 2.0kb upstream 10166 true Tp57577_TGAC_v2_scaf_981: 47180-57345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_981: 55346-57345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 2.0kb downstream 2.0kb downstream 10166 true Tp57577_TGAC_v2_scaf_981: 45180-55345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_981: 45180-47179 Trifolium pratense
Tp57577_TGAC_v2_gene23186 5.0kb upstream 5.0kb upstream 13166 true Tp57577_TGAC_v2_scaf_981: 47180-60345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_981: 55346-60345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 5.0kb downstream 5.0kb downstream 13166 true Tp57577_TGAC_v2_scaf_981: 42180-55345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_981: 42180-47179 Trifolium pratense
Tp57577_TGAC_v2_gene23186 10.0kb upstream 10.0kb upstream 18166 true Tp57577_TGAC_v2_scaf_981: 47180-65345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_981: 55346-65345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 10.0kb downstream 10.0kb downstream 18166 true Tp57577_TGAC_v2_scaf_981: 37180-55345 Trifolium pratense
Tp57577_TGAC_v2_gene23186 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_981: 37180-47179 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310659 5265 Fabidae View MSA
124066396 5270 Rosid View MSA
123736584 5271 Pentapetalae View MSA
122793491 5272 Eudicot View MSA
122045486 5273 Angiosperm View MSA
121345018 5274 Embryophyte View MSA
123425111 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain