Gene : Tp57577_TGAC_v2_gene23184 T. pratense v2
Defline:  (1 of 1) PTHR15245:SF23 - PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1-RELATED Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene23184 Secondary Identifier:  ? PAC:35958801
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6351 Trifolium pratense pathologic  
Tpratense PWY-6352 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23184 0.5kb upstream 0.5kb upstream 2054 true Tp57577_TGAC_v2_scaf_981: 32592-34645 Trifolium pratense
Tp57577_TGAC_v2_gene23184 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_981: 34146-34645 Trifolium pratense
Tp57577_TGAC_v2_gene23184 0.5kb downstream 0.5kb downstream 2054 true Tp57577_TGAC_v2_scaf_981: 32092-34145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_981: 32092-32591 Trifolium pratense
Tp57577_TGAC_v2_gene23184 1.0kb upstream 1.0kb upstream 2554 true Tp57577_TGAC_v2_scaf_981: 32592-35145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_981: 34146-35145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 1.0kb downstream 1.0kb downstream 2554 true Tp57577_TGAC_v2_scaf_981: 31592-34145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_981: 31592-32591 Trifolium pratense
Tp57577_TGAC_v2_gene23184 2.0kb upstream 2.0kb upstream 3554 true Tp57577_TGAC_v2_scaf_981: 32592-36145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_981: 34146-36145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 2.0kb downstream 2.0kb downstream 3554 true Tp57577_TGAC_v2_scaf_981: 30592-34145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_981: 30592-32591 Trifolium pratense
Tp57577_TGAC_v2_gene23184 5.0kb upstream 5.0kb upstream 6554 true Tp57577_TGAC_v2_scaf_981: 32592-39145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_981: 34146-39145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 5.0kb downstream 5.0kb downstream 6554 true Tp57577_TGAC_v2_scaf_981: 27592-34145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_981: 27592-32591 Trifolium pratense
Tp57577_TGAC_v2_gene23184 10.0kb upstream 10.0kb upstream 11554 true Tp57577_TGAC_v2_scaf_981: 32592-44145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_981: 34146-44145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 10.0kb downstream 10.0kb downstream 11554 true Tp57577_TGAC_v2_scaf_981: 22592-34145 Trifolium pratense
Tp57577_TGAC_v2_gene23184 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_981: 22592-32591 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028211 5273 Angiosperm View MSA
122312461 5265 Fabidae View MSA
124066276 5270 Rosid View MSA
123740399 5271 Pentapetalae View MSA
122769978 5272 Eudicot View MSA
123429040 5275 Viridiplantae View MSA
121297732 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain