Gene : Tp57577_TGAC_v2_gene23182 T. pratense v2
Defline:  (1 of 1) PTHR11413:SF56 - CYSTEINE PROTEINASE INHIBITOR 3-RELATED Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene23182 Secondary Identifier:  ? PAC:35958802
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23182 0.5kb upstream 0.5kb upstream 6994 true Tp57577_TGAC_v2_scaf_981: 17442-24435 Trifolium pratense
Tp57577_TGAC_v2_gene23182 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_981: 23936-24435 Trifolium pratense
Tp57577_TGAC_v2_gene23182 0.5kb downstream 0.5kb downstream 6994 true Tp57577_TGAC_v2_scaf_981: 16942-23935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_981: 16942-17441 Trifolium pratense
Tp57577_TGAC_v2_gene23182 1.0kb upstream 1.0kb upstream 7494 true Tp57577_TGAC_v2_scaf_981: 17442-24935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_981: 23936-24935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 1.0kb downstream 1.0kb downstream 7494 true Tp57577_TGAC_v2_scaf_981: 16442-23935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_981: 16442-17441 Trifolium pratense
Tp57577_TGAC_v2_gene23182 2.0kb upstream 2.0kb upstream 8494 true Tp57577_TGAC_v2_scaf_981: 17442-25935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_981: 23936-25935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 2.0kb downstream 2.0kb downstream 8494 true Tp57577_TGAC_v2_scaf_981: 15442-23935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_981: 15442-17441 Trifolium pratense
Tp57577_TGAC_v2_gene23182 5.0kb upstream 5.0kb upstream 11494 true Tp57577_TGAC_v2_scaf_981: 17442-28935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_981: 23936-28935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 5.0kb downstream 5.0kb downstream 11494 true Tp57577_TGAC_v2_scaf_981: 12442-23935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_981: 12442-17441 Trifolium pratense
Tp57577_TGAC_v2_gene23182 10.0kb upstream 10.0kb upstream 16494 true Tp57577_TGAC_v2_scaf_981: 17442-33935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_981: 23936-33935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 10.0kb downstream 10.0kb downstream 16494 true Tp57577_TGAC_v2_scaf_981: 7442-23935 Trifolium pratense
Tp57577_TGAC_v2_gene23182 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_981: 7442-17441 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308469 5265 Fabidae View MSA
124074008 5270 Rosid View MSA
123740864 5271 Pentapetalae View MSA
122789920 5272 Eudicot View MSA
122041687 5273 Angiosperm View MSA
121347429 5274 Embryophyte View MSA
123424301 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain