Gene : Tp57577_TGAC_v2_gene10001 T. pratense v2
Defline:  (1 of 1) PTHR23151//PTHR23151:SF70 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  12
Name:  ? Tp57577_TGAC_v2_gene10001 Secondary Identifier:  ? PAC:35968192
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY0-1264 Trifolium pratense pathologic  
Tpratense PWY-4381 Trifolium pratense pathologic  
Tpratense PWY-5156 Trifolium pratense pathologic  
Tpratense PWY-7388 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10001 0.5kb upstream 0.5kb upstream 4996 true Tp57577_TGAC_v2_scaf_509: 70576-75571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_509: 70576-71075 Trifolium pratense
Tp57577_TGAC_v2_gene10001 0.5kb downstream 0.5kb downstream 4996 true Tp57577_TGAC_v2_scaf_509: 71076-76071 Trifolium pratense
Tp57577_TGAC_v2_gene10001 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_509: 75572-76071 Trifolium pratense
Tp57577_TGAC_v2_gene10001 1.0kb upstream 1.0kb upstream 5496 true Tp57577_TGAC_v2_scaf_509: 70076-75571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_509: 70076-71075 Trifolium pratense
Tp57577_TGAC_v2_gene10001 1.0kb downstream 1.0kb downstream 5496 true Tp57577_TGAC_v2_scaf_509: 71076-76571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_509: 75572-76571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 2.0kb upstream 2.0kb upstream 6496 true Tp57577_TGAC_v2_scaf_509: 69076-75571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_509: 69076-71075 Trifolium pratense
Tp57577_TGAC_v2_gene10001 2.0kb downstream 2.0kb downstream 6496 true Tp57577_TGAC_v2_scaf_509: 71076-77571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_509: 75572-77571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 5.0kb upstream 5.0kb upstream 9496 true Tp57577_TGAC_v2_scaf_509: 66076-75571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_509: 66076-71075 Trifolium pratense
Tp57577_TGAC_v2_gene10001 5.0kb downstream 5.0kb downstream 9496 true Tp57577_TGAC_v2_scaf_509: 71076-80571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_509: 75572-80571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 10.0kb upstream 10.0kb upstream 14496 true Tp57577_TGAC_v2_scaf_509: 61076-75571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_509: 61076-71075 Trifolium pratense
Tp57577_TGAC_v2_gene10001 10.0kb downstream 10.0kb downstream 14496 true Tp57577_TGAC_v2_scaf_509: 71076-85571 Trifolium pratense
Tp57577_TGAC_v2_gene10001 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_509: 75572-85571 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311832 5265 Fabidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain