Gene : Tp57577_TGAC_v2_gene21406 T. pratense v2
Defline:  (1 of 8) PTHR21649:SF26 - CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene21406 Secondary Identifier:  ? PAC:35952652
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21406 0.5kb upstream 0.5kb upstream 1461 true Tp57577_TGAC_v2_scaf_372: 61665-63125 Trifolium pratense
Tp57577_TGAC_v2_gene21406 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_372: 62626-63125 Trifolium pratense
Tp57577_TGAC_v2_gene21406 0.5kb downstream 0.5kb downstream 1461 true Tp57577_TGAC_v2_scaf_372: 61165-62625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_372: 61165-61664 Trifolium pratense
Tp57577_TGAC_v2_gene21406 1.0kb upstream 1.0kb upstream 1961 true Tp57577_TGAC_v2_scaf_372: 61665-63625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_372: 62626-63625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 1.0kb downstream 1.0kb downstream 1961 true Tp57577_TGAC_v2_scaf_372: 60665-62625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_372: 60665-61664 Trifolium pratense
Tp57577_TGAC_v2_gene21406 2.0kb upstream 2.0kb upstream 2961 true Tp57577_TGAC_v2_scaf_372: 61665-64625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_372: 62626-64625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 2.0kb downstream 2.0kb downstream 2961 true Tp57577_TGAC_v2_scaf_372: 59665-62625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_372: 59665-61664 Trifolium pratense
Tp57577_TGAC_v2_gene21406 5.0kb upstream 5.0kb upstream 5961 true Tp57577_TGAC_v2_scaf_372: 61665-67625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_372: 62626-67625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 5.0kb downstream 5.0kb downstream 5961 true Tp57577_TGAC_v2_scaf_372: 56665-62625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_372: 56665-61664 Trifolium pratense
Tp57577_TGAC_v2_gene21406 10.0kb upstream 10.0kb upstream 10961 true Tp57577_TGAC_v2_scaf_372: 61665-72625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_372: 62626-72625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 10.0kb downstream 10.0kb downstream 10961 true Tp57577_TGAC_v2_scaf_372: 51665-62625 Trifolium pratense
Tp57577_TGAC_v2_gene21406 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_372: 51665-61664 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314115 5265 Fabidae View MSA
124072480 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain