Gene : Tp57577_TGAC_v2_gene21399 T. pratense v2
Defline:  (1 of 18) PF03763 - Remorin, C-terminal region (Remorin_C) Genomic Order:  19
Name:  ? Tp57577_TGAC_v2_gene21399 Secondary Identifier:  ? PAC:35952654
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21399 0.5kb upstream 0.5kb upstream 2725 true Tp57577_TGAC_v2_scaf_372: 184846-187570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_372: 184846-185345 Trifolium pratense
Tp57577_TGAC_v2_gene21399 0.5kb downstream 0.5kb downstream 2725 true Tp57577_TGAC_v2_scaf_372: 185346-188070 Trifolium pratense
Tp57577_TGAC_v2_gene21399 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_372: 187571-188070 Trifolium pratense
Tp57577_TGAC_v2_gene21399 1.0kb upstream 1.0kb upstream 3225 true Tp57577_TGAC_v2_scaf_372: 184346-187570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_372: 184346-185345 Trifolium pratense
Tp57577_TGAC_v2_gene21399 1.0kb downstream 1.0kb downstream 3225 true Tp57577_TGAC_v2_scaf_372: 185346-188570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_372: 187571-188570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 2.0kb upstream 2.0kb upstream 4225 true Tp57577_TGAC_v2_scaf_372: 183346-187570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_372: 183346-185345 Trifolium pratense
Tp57577_TGAC_v2_gene21399 2.0kb downstream 2.0kb downstream 4225 true Tp57577_TGAC_v2_scaf_372: 185346-189570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_372: 187571-189570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 5.0kb upstream 5.0kb upstream 7225 true Tp57577_TGAC_v2_scaf_372: 180346-187570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_372: 180346-185345 Trifolium pratense
Tp57577_TGAC_v2_gene21399 5.0kb downstream 5.0kb downstream 7225 true Tp57577_TGAC_v2_scaf_372: 185346-192570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_372: 187571-192570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 10.0kb upstream 10.0kb upstream 12225 true Tp57577_TGAC_v2_scaf_372: 175346-187570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_372: 175346-185345 Trifolium pratense
Tp57577_TGAC_v2_gene21399 10.0kb downstream 10.0kb downstream 12225 true Tp57577_TGAC_v2_scaf_372: 185346-197570 Trifolium pratense
Tp57577_TGAC_v2_gene21399 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_372: 187571-197570 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313219 5265 Fabidae View MSA
124064015 5270 Rosid View MSA
123736918 5271 Pentapetalae View MSA
122790466 5272 Eudicot View MSA
122046569 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain