Gene : Tp57577_TGAC_v2_gene31421 T. pratense v2
Defline:  (1 of 7) K13464 - jasmonate ZIM domain-containing protein (JAZ) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene31421 Secondary Identifier:  ? PAC:35952430
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene31421 0.5kb upstream 0.5kb upstream 1943 true Tp57577_TGAC_v2_scaf_721: 20361-22303 Trifolium pratense
Tp57577_TGAC_v2_gene31421 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_721: 21804-22303 Trifolium pratense
Tp57577_TGAC_v2_gene31421 0.5kb downstream 0.5kb downstream 1943 true Tp57577_TGAC_v2_scaf_721: 19861-21803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_721: 19861-20360 Trifolium pratense
Tp57577_TGAC_v2_gene31421 1.0kb upstream 1.0kb upstream 2443 true Tp57577_TGAC_v2_scaf_721: 20361-22803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_721: 21804-22803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 1.0kb downstream 1.0kb downstream 2443 true Tp57577_TGAC_v2_scaf_721: 19361-21803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_721: 19361-20360 Trifolium pratense
Tp57577_TGAC_v2_gene31421 2.0kb upstream 2.0kb upstream 3443 true Tp57577_TGAC_v2_scaf_721: 20361-23803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_721: 21804-23803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 2.0kb downstream 2.0kb downstream 3443 true Tp57577_TGAC_v2_scaf_721: 18361-21803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_721: 18361-20360 Trifolium pratense
Tp57577_TGAC_v2_gene31421 5.0kb upstream 5.0kb upstream 6443 true Tp57577_TGAC_v2_scaf_721: 20361-26803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_721: 21804-26803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 5.0kb downstream 5.0kb downstream 6443 true Tp57577_TGAC_v2_scaf_721: 15361-21803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_721: 15361-20360 Trifolium pratense
Tp57577_TGAC_v2_gene31421 10.0kb upstream 10.0kb upstream 11443 true Tp57577_TGAC_v2_scaf_721: 20361-31803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_721: 21804-31803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 10.0kb downstream 10.0kb downstream 11443 true Tp57577_TGAC_v2_scaf_721: 10361-21803 Trifolium pratense
Tp57577_TGAC_v2_gene31421 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_721: 10361-20360 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315145 5265 Fabidae View MSA
124071926 5270 Rosid View MSA
123747835 5271 Pentapetalae View MSA
122797679 5272 Eudicot View MSA
122046349 5273 Angiosperm View MSA
121349662 5274 Embryophyte View MSA
123381390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain