Gene : Tp57577_TGAC_v2_gene17794 T. pratense v2
Defline:  (1 of 2) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Genomic Order:  13
Name:  ? Tp57577_TGAC_v2_gene17794 Secondary Identifier:  ? PAC:35960794
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY0-162 Trifolium pratense pathologic  
Tpratense PWY-5686 Trifolium pratense pathologic  
Tpratense PWY-7211 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17794 0.5kb upstream 0.5kb upstream 4706 true Tp57577_TGAC_v2_scaf_364: 96190-100895 Trifolium pratense
Tp57577_TGAC_v2_gene17794 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_364: 100396-100895 Trifolium pratense
Tp57577_TGAC_v2_gene17794 0.5kb downstream 0.5kb downstream 4706 true Tp57577_TGAC_v2_scaf_364: 95690-100395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_364: 95690-96189 Trifolium pratense
Tp57577_TGAC_v2_gene17794 1.0kb upstream 1.0kb upstream 5206 true Tp57577_TGAC_v2_scaf_364: 96190-101395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_364: 100396-101395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 1.0kb downstream 1.0kb downstream 5206 true Tp57577_TGAC_v2_scaf_364: 95190-100395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_364: 95190-96189 Trifolium pratense
Tp57577_TGAC_v2_gene17794 2.0kb upstream 2.0kb upstream 6206 true Tp57577_TGAC_v2_scaf_364: 96190-102395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_364: 100396-102395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 2.0kb downstream 2.0kb downstream 6206 true Tp57577_TGAC_v2_scaf_364: 94190-100395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_364: 94190-96189 Trifolium pratense
Tp57577_TGAC_v2_gene17794 5.0kb upstream 5.0kb upstream 9206 true Tp57577_TGAC_v2_scaf_364: 96190-105395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_364: 100396-105395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 5.0kb downstream 5.0kb downstream 9206 true Tp57577_TGAC_v2_scaf_364: 91190-100395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_364: 91190-96189 Trifolium pratense
Tp57577_TGAC_v2_gene17794 10.0kb upstream 10.0kb upstream 14206 true Tp57577_TGAC_v2_scaf_364: 96190-110395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_364: 100396-110395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 10.0kb downstream 10.0kb downstream 14206 true Tp57577_TGAC_v2_scaf_364: 86190-100395 Trifolium pratense
Tp57577_TGAC_v2_gene17794 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_364: 86190-96189 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300659 5265 Fabidae View MSA
124060638 5270 Rosid View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain