Gene : Tp57577_TGAC_v2_gene17802 T. pratense v2
Defline:  (1 of 4) PTHR10315//PTHR10315:SF29 - SEVEN IN ABSENTIA HOMOLOG // SUBFAMILY NOT NAMED Genomic Order:  12
Name:  ? Tp57577_TGAC_v2_gene17802 Secondary Identifier:  ? PAC:35960774
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17802 0.5kb upstream 0.5kb upstream 4729 true Tp57577_TGAC_v2_scaf_364: 89556-94284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_364: 89556-90055 Trifolium pratense
Tp57577_TGAC_v2_gene17802 0.5kb downstream 0.5kb downstream 4729 true Tp57577_TGAC_v2_scaf_364: 90056-94784 Trifolium pratense
Tp57577_TGAC_v2_gene17802 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_364: 94285-94784 Trifolium pratense
Tp57577_TGAC_v2_gene17802 1.0kb upstream 1.0kb upstream 5229 true Tp57577_TGAC_v2_scaf_364: 89056-94284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_364: 89056-90055 Trifolium pratense
Tp57577_TGAC_v2_gene17802 1.0kb downstream 1.0kb downstream 5229 true Tp57577_TGAC_v2_scaf_364: 90056-95284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_364: 94285-95284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 2.0kb upstream 2.0kb upstream 6229 true Tp57577_TGAC_v2_scaf_364: 88056-94284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_364: 88056-90055 Trifolium pratense
Tp57577_TGAC_v2_gene17802 2.0kb downstream 2.0kb downstream 6229 true Tp57577_TGAC_v2_scaf_364: 90056-96284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_364: 94285-96284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 5.0kb upstream 5.0kb upstream 9229 true Tp57577_TGAC_v2_scaf_364: 85056-94284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_364: 85056-90055 Trifolium pratense
Tp57577_TGAC_v2_gene17802 5.0kb downstream 5.0kb downstream 9229 true Tp57577_TGAC_v2_scaf_364: 90056-99284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_364: 94285-99284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 10.0kb upstream 10.0kb upstream 14229 true Tp57577_TGAC_v2_scaf_364: 80056-94284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_364: 80056-90055 Trifolium pratense
Tp57577_TGAC_v2_gene17802 10.0kb downstream 10.0kb downstream 14229 true Tp57577_TGAC_v2_scaf_364: 90056-104284 Trifolium pratense
Tp57577_TGAC_v2_gene17802 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_364: 94285-104284 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306983 5265 Fabidae View MSA
124069632 5270 Rosid View MSA
123750736 5271 Pentapetalae View MSA
122797657 5272 Eudicot View MSA
122049350 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain