Gene : Tp57577_TGAC_v2_gene14066 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  9
Name:  ? Tp57577_TGAC_v2_gene14066 Secondary Identifier:  ? PAC:35973839
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14066 0.5kb upstream 0.5kb upstream 3689 true Tp57577_TGAC_v2_scaf_442: 71787-75475 Trifolium pratense
Tp57577_TGAC_v2_gene14066 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_442: 74976-75475 Trifolium pratense
Tp57577_TGAC_v2_gene14066 0.5kb downstream 0.5kb downstream 3689 true Tp57577_TGAC_v2_scaf_442: 71287-74975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_442: 71287-71786 Trifolium pratense
Tp57577_TGAC_v2_gene14066 1.0kb upstream 1.0kb upstream 4189 true Tp57577_TGAC_v2_scaf_442: 71787-75975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_442: 74976-75975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 1.0kb downstream 1.0kb downstream 4189 true Tp57577_TGAC_v2_scaf_442: 70787-74975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_442: 70787-71786 Trifolium pratense
Tp57577_TGAC_v2_gene14066 2.0kb upstream 2.0kb upstream 5189 true Tp57577_TGAC_v2_scaf_442: 71787-76975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_442: 74976-76975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 2.0kb downstream 2.0kb downstream 5189 true Tp57577_TGAC_v2_scaf_442: 69787-74975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_442: 69787-71786 Trifolium pratense
Tp57577_TGAC_v2_gene14066 5.0kb upstream 5.0kb upstream 8189 true Tp57577_TGAC_v2_scaf_442: 71787-79975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_442: 74976-79975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 5.0kb downstream 5.0kb downstream 8189 true Tp57577_TGAC_v2_scaf_442: 66787-74975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_442: 66787-71786 Trifolium pratense
Tp57577_TGAC_v2_gene14066 10.0kb upstream 10.0kb upstream 13189 true Tp57577_TGAC_v2_scaf_442: 71787-84975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_442: 74976-84975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 10.0kb downstream 10.0kb downstream 13189 true Tp57577_TGAC_v2_scaf_442: 61787-74975 Trifolium pratense
Tp57577_TGAC_v2_gene14066 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_442: 61787-71786 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306111 5265 Fabidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain