Gene : Tp57577_TGAC_v2_gene35256 T. pratense v2
Defline:  (1 of 1) PTHR11079:SF85 - RNA PSEUDOURIDYLATE SYNTHASE DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  9
Name:  ? Tp57577_TGAC_v2_gene35256 Secondary Identifier:  ? PAC:35985119
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene35256 0.5kb upstream 0.5kb upstream 7958 true Tp57577_TGAC_v2_scaf_634: 86698-94655 Trifolium pratense
Tp57577_TGAC_v2_gene35256 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_634: 94156-94655 Trifolium pratense
Tp57577_TGAC_v2_gene35256 0.5kb downstream 0.5kb downstream 7958 true Tp57577_TGAC_v2_scaf_634: 86198-94155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_634: 86198-86697 Trifolium pratense
Tp57577_TGAC_v2_gene35256 1.0kb upstream 1.0kb upstream 8458 true Tp57577_TGAC_v2_scaf_634: 86698-95155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_634: 94156-95155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 1.0kb downstream 1.0kb downstream 8458 true Tp57577_TGAC_v2_scaf_634: 85698-94155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_634: 85698-86697 Trifolium pratense
Tp57577_TGAC_v2_gene35256 2.0kb upstream 2.0kb upstream 9458 true Tp57577_TGAC_v2_scaf_634: 86698-96155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_634: 94156-96155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 2.0kb downstream 2.0kb downstream 9458 true Tp57577_TGAC_v2_scaf_634: 84698-94155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_634: 84698-86697 Trifolium pratense
Tp57577_TGAC_v2_gene35256 5.0kb upstream 5.0kb upstream 12458 true Tp57577_TGAC_v2_scaf_634: 86698-99155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_634: 94156-99155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 5.0kb downstream 5.0kb downstream 12458 true Tp57577_TGAC_v2_scaf_634: 81698-94155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_634: 81698-86697 Trifolium pratense
Tp57577_TGAC_v2_gene35256 10.0kb upstream 10.0kb upstream 17458 true Tp57577_TGAC_v2_scaf_634: 86698-104155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_634: 94156-104155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 10.0kb downstream 10.0kb downstream 17458 true Tp57577_TGAC_v2_scaf_634: 76698-94155 Trifolium pratense
Tp57577_TGAC_v2_gene35256 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_634: 76698-86697 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300571 5265 Fabidae View MSA
124064384 5270 Rosid View MSA
123747081 5271 Pentapetalae View MSA
122790288 5272 Eudicot View MSA
122047695 5273 Angiosperm View MSA
121349064 5274 Embryophyte View MSA
123426945 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain