Gene : Tp57577_TGAC_v2_gene13637 T. pratense v2

Defline:  (1 of 8) PF12043 - Domain of unknown function (DUF3527) (DUF3527) Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene13637 Secondary Identifier:  ? PAC:35973576

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13637 0.5kb upstream 0.5kb upstream 4092 true Tp57577_TGAC_v2_scaf_425: 110984-115075 Trifolium pratense
Tp57577_TGAC_v2_gene13637 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_425: 114576-115075 Trifolium pratense
Tp57577_TGAC_v2_gene13637 0.5kb downstream 0.5kb downstream 4092 true Tp57577_TGAC_v2_scaf_425: 110484-114575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_425: 110484-110983 Trifolium pratense
Tp57577_TGAC_v2_gene13637 1.0kb upstream 1.0kb upstream 4592 true Tp57577_TGAC_v2_scaf_425: 110984-115575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_425: 114576-115575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 1.0kb downstream 1.0kb downstream 4592 true Tp57577_TGAC_v2_scaf_425: 109984-114575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_425: 109984-110983 Trifolium pratense
Tp57577_TGAC_v2_gene13637 2.0kb upstream 2.0kb upstream 5592 true Tp57577_TGAC_v2_scaf_425: 110984-116575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_425: 114576-116575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 2.0kb downstream 2.0kb downstream 5592 true Tp57577_TGAC_v2_scaf_425: 108984-114575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_425: 108984-110983 Trifolium pratense
Tp57577_TGAC_v2_gene13637 5.0kb upstream 5.0kb upstream 8592 true Tp57577_TGAC_v2_scaf_425: 110984-119575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_425: 114576-119575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 5.0kb downstream 5.0kb downstream 8592 true Tp57577_TGAC_v2_scaf_425: 105984-114575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_425: 105984-110983 Trifolium pratense
Tp57577_TGAC_v2_gene13637 10.0kb upstream 10.0kb upstream 13592 true Tp57577_TGAC_v2_scaf_425: 110984-124575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_425: 114576-124575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 10.0kb downstream 10.0kb downstream 13592 true Tp57577_TGAC_v2_scaf_425: 100984-114575 Trifolium pratense
Tp57577_TGAC_v2_gene13637 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_425: 100984-110983 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122287720 5265 Fabidae View MSA
124066548 5270 Rosid View MSA
123746890 5271 Pentapetalae View MSA
122788317 5272 Eudicot View MSA
122041699 5273 Angiosperm View MSA
121309882 5274 Embryophyte View MSA
123347520 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain