Gene : Tp57577_TGAC_v2_gene22315 T. pratense v2
Defline:  (1 of 1) KOG4646 - Uncharacterized conserved protein, contains ARM repeats Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene22315 Secondary Identifier:  ? PAC:35951758
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22315 0.5kb upstream 0.5kb upstream 6376 true Tp57577_TGAC_v2_scaf_691: 83960-90335 Trifolium pratense
Tp57577_TGAC_v2_gene22315 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_691: 89836-90335 Trifolium pratense
Tp57577_TGAC_v2_gene22315 0.5kb downstream 0.5kb downstream 6376 true Tp57577_TGAC_v2_scaf_691: 83460-89835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_691: 83460-83959 Trifolium pratense
Tp57577_TGAC_v2_gene22315 1.0kb upstream 1.0kb upstream 6876 true Tp57577_TGAC_v2_scaf_691: 83960-90835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_691: 89836-90835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 1.0kb downstream 1.0kb downstream 6876 true Tp57577_TGAC_v2_scaf_691: 82960-89835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_691: 82960-83959 Trifolium pratense
Tp57577_TGAC_v2_gene22315 2.0kb upstream 2.0kb upstream 7876 true Tp57577_TGAC_v2_scaf_691: 83960-91835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_691: 89836-91835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 2.0kb downstream 2.0kb downstream 7876 true Tp57577_TGAC_v2_scaf_691: 81960-89835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_691: 81960-83959 Trifolium pratense
Tp57577_TGAC_v2_gene22315 5.0kb upstream 5.0kb upstream 10876 true Tp57577_TGAC_v2_scaf_691: 83960-94835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_691: 89836-94835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 5.0kb downstream 5.0kb downstream 10876 true Tp57577_TGAC_v2_scaf_691: 78960-89835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_691: 78960-83959 Trifolium pratense
Tp57577_TGAC_v2_gene22315 10.0kb upstream 10.0kb upstream 15876 true Tp57577_TGAC_v2_scaf_691: 83960-99835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_691: 89836-99835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 10.0kb downstream 10.0kb downstream 15876 true Tp57577_TGAC_v2_scaf_691: 73960-89835 Trifolium pratense
Tp57577_TGAC_v2_gene22315 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_691: 73960-83959 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306105 5265 Fabidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain