Gene : Tp57577_TGAC_v2_gene9130 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  14
Name:  ? Tp57577_TGAC_v2_gene9130 Secondary Identifier:  ? PAC:35954755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9130 0.5kb upstream 0.5kb upstream 3309 true Tp57577_TGAC_v2_scaf_527: 148335-151643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_527: 148335-148834 Trifolium pratense
Tp57577_TGAC_v2_gene9130 0.5kb downstream 0.5kb downstream 3309 true Tp57577_TGAC_v2_scaf_527: 148835-152143 Trifolium pratense
Tp57577_TGAC_v2_gene9130 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_527: 151644-152143 Trifolium pratense
Tp57577_TGAC_v2_gene9130 1.0kb upstream 1.0kb upstream 3809 true Tp57577_TGAC_v2_scaf_527: 147835-151643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_527: 147835-148834 Trifolium pratense
Tp57577_TGAC_v2_gene9130 1.0kb downstream 1.0kb downstream 3809 true Tp57577_TGAC_v2_scaf_527: 148835-152643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_527: 151644-152643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 2.0kb upstream 2.0kb upstream 4809 true Tp57577_TGAC_v2_scaf_527: 146835-151643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_527: 146835-148834 Trifolium pratense
Tp57577_TGAC_v2_gene9130 2.0kb downstream 2.0kb downstream 4809 true Tp57577_TGAC_v2_scaf_527: 148835-153643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_527: 151644-153643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 5.0kb upstream 5.0kb upstream 7809 true Tp57577_TGAC_v2_scaf_527: 143835-151643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_527: 143835-148834 Trifolium pratense
Tp57577_TGAC_v2_gene9130 5.0kb downstream 5.0kb downstream 7809 true Tp57577_TGAC_v2_scaf_527: 148835-156643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_527: 151644-156643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 10.0kb upstream 10.0kb upstream 12809 true Tp57577_TGAC_v2_scaf_527: 138835-151643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_527: 138835-148834 Trifolium pratense
Tp57577_TGAC_v2_gene9130 10.0kb downstream 10.0kb downstream 12809 true Tp57577_TGAC_v2_scaf_527: 148835-161643 Trifolium pratense
Tp57577_TGAC_v2_gene9130 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_527: 151644-161643 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302790 5265 Fabidae View MSA
124062477 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain