Gene : Tp57577_TGAC_v2_gene29763 T. pratense v2
Defline:  (1 of 1) PTHR10509:SF27 - PROTEIN COMT-1 Genomic Order:  4
Name:  ? Tp57577_TGAC_v2_gene29763 Secondary Identifier:  ? PAC:35968996
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1121 Trifolium pratense pathologic  
Tpratense PWY-361 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29763 0.5kb upstream 0.5kb upstream 4889 true Tp57577_TGAC_v2_scaf_767: 69551-74439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_767: 69551-70050 Trifolium pratense
Tp57577_TGAC_v2_gene29763 0.5kb downstream 0.5kb downstream 4889 true Tp57577_TGAC_v2_scaf_767: 70051-74939 Trifolium pratense
Tp57577_TGAC_v2_gene29763 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_767: 74440-74939 Trifolium pratense
Tp57577_TGAC_v2_gene29763 1.0kb upstream 1.0kb upstream 5389 true Tp57577_TGAC_v2_scaf_767: 69051-74439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_767: 69051-70050 Trifolium pratense
Tp57577_TGAC_v2_gene29763 1.0kb downstream 1.0kb downstream 5389 true Tp57577_TGAC_v2_scaf_767: 70051-75439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_767: 74440-75439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 2.0kb upstream 2.0kb upstream 6389 true Tp57577_TGAC_v2_scaf_767: 68051-74439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_767: 68051-70050 Trifolium pratense
Tp57577_TGAC_v2_gene29763 2.0kb downstream 2.0kb downstream 6389 true Tp57577_TGAC_v2_scaf_767: 70051-76439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_767: 74440-76439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 5.0kb upstream 5.0kb upstream 9389 true Tp57577_TGAC_v2_scaf_767: 65051-74439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_767: 65051-70050 Trifolium pratense
Tp57577_TGAC_v2_gene29763 5.0kb downstream 5.0kb downstream 9389 true Tp57577_TGAC_v2_scaf_767: 70051-79439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_767: 74440-79439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 10.0kb upstream 10.0kb upstream 14389 true Tp57577_TGAC_v2_scaf_767: 60051-74439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_767: 60051-70050 Trifolium pratense
Tp57577_TGAC_v2_gene29763 10.0kb downstream 10.0kb downstream 14389 true Tp57577_TGAC_v2_scaf_767: 70051-84439 Trifolium pratense
Tp57577_TGAC_v2_gene29763 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_767: 74440-84439 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303007 5265 Fabidae View MSA
124062040 5270 Rosid View MSA
123738490 5271 Pentapetalae View MSA
122794453 5272 Eudicot View MSA
122046584 5273 Angiosperm View MSA
121345424 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain