Gene : Tp57577_TGAC_v2_gene40756 T. pratense v2
Defline:  (1 of 2) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene40756 Secondary Identifier:  ? PAC:35985518
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CALVIN-PWY Trifolium pratense pathologic  
Tpratense PHOTOALL-PWY Trifolium pratense pathologic  
Tpratense PWY-5723 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene40756 0.5kb upstream 0.5kb upstream 2229 true Tp57577_TGAC_v2_scaf_6779: 1-2229 Trifolium pratense
Tp57577_TGAC_v2_gene40756 0.5kb upstream 0.5kb upstream 265 false Tp57577_TGAC_v2_scaf_6779: 1-265 Trifolium pratense
Tp57577_TGAC_v2_gene40756 0.5kb downstream 0.5kb downstream 2057 true Tp57577_TGAC_v2_scaf_6779: 266-2322 Trifolium pratense
Tp57577_TGAC_v2_gene40756 0.5kb downstream 0.5kb downstream 93 false Tp57577_TGAC_v2_scaf_6779: 2230-2322 Trifolium pratense
Tp57577_TGAC_v2_gene40756 1.0kb upstream 1.0kb upstream 2229 true Tp57577_TGAC_v2_scaf_6779: 1-2229 Trifolium pratense
Tp57577_TGAC_v2_gene40756 1.0kb upstream 1.0kb upstream 265 false Tp57577_TGAC_v2_scaf_6779: 1-265 Trifolium pratense
Tp57577_TGAC_v2_gene40756 1.0kb downstream 1.0kb downstream 2057 true Tp57577_TGAC_v2_scaf_6779: 266-2322 Trifolium pratense
Tp57577_TGAC_v2_gene40756 1.0kb downstream 1.0kb downstream 93 false Tp57577_TGAC_v2_scaf_6779: 2230-2322 Trifolium pratense
Tp57577_TGAC_v2_gene40756 2.0kb upstream 2.0kb upstream 2229 true Tp57577_TGAC_v2_scaf_6779: 1-2229 Trifolium pratense
Tp57577_TGAC_v2_gene40756 2.0kb upstream 2.0kb upstream 265 false Tp57577_TGAC_v2_scaf_6779: 1-265 Trifolium pratense
Tp57577_TGAC_v2_gene40756 2.0kb downstream 2.0kb downstream 2057 true Tp57577_TGAC_v2_scaf_6779: 266-2322 Trifolium pratense
Tp57577_TGAC_v2_gene40756 2.0kb downstream 2.0kb downstream 93 false Tp57577_TGAC_v2_scaf_6779: 2230-2322 Trifolium pratense
Tp57577_TGAC_v2_gene40756 5.0kb upstream 5.0kb upstream 2229 true Tp57577_TGAC_v2_scaf_6779: 1-2229 Trifolium pratense
Tp57577_TGAC_v2_gene40756 5.0kb upstream 5.0kb upstream 265 false Tp57577_TGAC_v2_scaf_6779: 1-265 Trifolium pratense
Tp57577_TGAC_v2_gene40756 5.0kb downstream 5.0kb downstream 2057 true Tp57577_TGAC_v2_scaf_6779: 266-2322 Trifolium pratense
Tp57577_TGAC_v2_gene40756 5.0kb downstream 5.0kb downstream 93 false Tp57577_TGAC_v2_scaf_6779: 2230-2322 Trifolium pratense
Tp57577_TGAC_v2_gene40756 10.0kb upstream 10.0kb upstream 2229 true Tp57577_TGAC_v2_scaf_6779: 1-2229 Trifolium pratense
Tp57577_TGAC_v2_gene40756 10.0kb upstream 10.0kb upstream 265 false Tp57577_TGAC_v2_scaf_6779: 1-265 Trifolium pratense
Tp57577_TGAC_v2_gene40756 10.0kb downstream 10.0kb downstream 2057 true Tp57577_TGAC_v2_scaf_6779: 266-2322 Trifolium pratense
Tp57577_TGAC_v2_gene40756 10.0kb downstream 10.0kb downstream 93 false Tp57577_TGAC_v2_scaf_6779: 2230-2322 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310075 5265 Fabidae View MSA
124070505 5270 Rosid View MSA
123742387 5271 Pentapetalae View MSA
122795056 5272 Eudicot View MSA
122048264 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain