Gene : Tp57577_TGAC_v2_gene15539 T. pratense v2
Defline:  (1 of 1) K00253 - isovaleryl-CoA dehydrogenase (IVD, ivd) Genomic Order:  1974
Name:  ? Tp57577_TGAC_v2_gene15539 Secondary Identifier:  ? PAC:35966268
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LEU-DEG2-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15539 0.5kb upstream 0.5kb upstream 6004 true Tp57577_TGAC_v2_LG4: 18473721-18479724 Trifolium pratense
Tp57577_TGAC_v2_gene15539 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 18479225-18479724 Trifolium pratense
Tp57577_TGAC_v2_gene15539 0.5kb downstream 0.5kb downstream 6004 true Tp57577_TGAC_v2_LG4: 18473221-18479224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 18473221-18473720 Trifolium pratense
Tp57577_TGAC_v2_gene15539 1.0kb upstream 1.0kb upstream 6504 true Tp57577_TGAC_v2_LG4: 18473721-18480224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 18479225-18480224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 1.0kb downstream 1.0kb downstream 6504 true Tp57577_TGAC_v2_LG4: 18472721-18479224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 18472721-18473720 Trifolium pratense
Tp57577_TGAC_v2_gene15539 2.0kb upstream 2.0kb upstream 7504 true Tp57577_TGAC_v2_LG4: 18473721-18481224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 18479225-18481224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 2.0kb downstream 2.0kb downstream 7504 true Tp57577_TGAC_v2_LG4: 18471721-18479224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 18471721-18473720 Trifolium pratense
Tp57577_TGAC_v2_gene15539 5.0kb upstream 5.0kb upstream 10504 true Tp57577_TGAC_v2_LG4: 18473721-18484224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 18479225-18484224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 5.0kb downstream 5.0kb downstream 10504 true Tp57577_TGAC_v2_LG4: 18468721-18479224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 18468721-18473720 Trifolium pratense
Tp57577_TGAC_v2_gene15539 10.0kb upstream 10.0kb upstream 15504 true Tp57577_TGAC_v2_LG4: 18473721-18489224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 18479225-18489224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 10.0kb downstream 10.0kb downstream 15504 true Tp57577_TGAC_v2_LG4: 18463721-18479224 Trifolium pratense
Tp57577_TGAC_v2_gene15539 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 18463721-18473720 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300577 5265 Fabidae View MSA
124064222 5270 Rosid View MSA
123745101 5271 Pentapetalae View MSA
122788646 5272 Eudicot View MSA
122042062 5273 Angiosperm View MSA
121346887 5274 Embryophyte View MSA
123427095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain