Gene : Tp57577_TGAC_v2_gene16836 T. pratense v2
Defline:  (1 of 12) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  1411
Name:  ? Tp57577_TGAC_v2_gene16836 Secondary Identifier:  ? PAC:35965542
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16836 0.5kb upstream 0.5kb upstream 5144 true Tp57577_TGAC_v2_LG4: 13380720-13385863 Trifolium pratense
Tp57577_TGAC_v2_gene16836 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 13385364-13385863 Trifolium pratense
Tp57577_TGAC_v2_gene16836 0.5kb downstream 0.5kb downstream 5144 true Tp57577_TGAC_v2_LG4: 13380220-13385363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 13380220-13380719 Trifolium pratense
Tp57577_TGAC_v2_gene16836 1.0kb upstream 1.0kb upstream 5644 true Tp57577_TGAC_v2_LG4: 13380720-13386363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 13385364-13386363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 1.0kb downstream 1.0kb downstream 5644 true Tp57577_TGAC_v2_LG4: 13379720-13385363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 13379720-13380719 Trifolium pratense
Tp57577_TGAC_v2_gene16836 2.0kb upstream 2.0kb upstream 6644 true Tp57577_TGAC_v2_LG4: 13380720-13387363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 13385364-13387363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 2.0kb downstream 2.0kb downstream 6644 true Tp57577_TGAC_v2_LG4: 13378720-13385363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 13378720-13380719 Trifolium pratense
Tp57577_TGAC_v2_gene16836 5.0kb upstream 5.0kb upstream 9644 true Tp57577_TGAC_v2_LG4: 13380720-13390363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 13385364-13390363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 5.0kb downstream 5.0kb downstream 9644 true Tp57577_TGAC_v2_LG4: 13375720-13385363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 13375720-13380719 Trifolium pratense
Tp57577_TGAC_v2_gene16836 10.0kb upstream 10.0kb upstream 14644 true Tp57577_TGAC_v2_LG4: 13380720-13395363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 13385364-13395363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 10.0kb downstream 10.0kb downstream 14644 true Tp57577_TGAC_v2_LG4: 13370720-13385363 Trifolium pratense
Tp57577_TGAC_v2_gene16836 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 13370720-13380719 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303756 5265 Fabidae View MSA
124072368 5270 Rosid View MSA
123748837 5271 Pentapetalae View MSA
122797134 5272 Eudicot View MSA
122049051 5273 Angiosperm View MSA
121347224 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain